ID I1LEQ5_SOYBN Unreviewed; 413 AA.
AC I1LEQ5;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=Origin of replication complex subunit 4 {ECO:0000256|PIRNR:PIRNR007858};
GN Name=100800582 {ECO:0000313|EnsemblPlants:KRH35837};
GN ORFNames=GLYMA_10G268100 {ECO:0000313|EMBL:KRH35837.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH35837};
RN [1] {ECO:0000313|EMBL:KRH35837.1, ECO:0000313|EnsemblPlants:KRH35837}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH35837};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH35837.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH35837}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH35837};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH35837.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH35837.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the origin recognition complex (ORC) that binds
CC origins of replication. {ECO:0000256|PIRNR:PIRNR007858}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR007858}.
CC -!- SIMILARITY: Belongs to the ORC4 family. {ECO:0000256|ARBA:ARBA00005334,
CC ECO:0000256|PIRNR:PIRNR007858}.
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DR EMBL; CM000843; KRH35837.1; -; Genomic_DNA.
DR RefSeq; XP_003536655.1; XM_003536607.3.
DR AlphaFoldDB; I1LEQ5; -.
DR SMR; I1LEQ5; -.
DR STRING; 3847.I1LEQ5; -.
DR PaxDb; 3847-GLYMA10G41410-1; -.
DR EnsemblPlants; KRH35837; KRH35837; GLYMA_10G268100.
DR GeneID; 100800582; -.
DR Gramene; KRH35837; KRH35837; GLYMA_10G268100.
DR KEGG; gmx:100800582; -.
DR eggNOG; KOG2228; Eukaryota.
DR HOGENOM; CLU_007115_0_1_1; -.
DR InParanoid; I1LEQ5; -.
DR OMA; ETKFRHH; -.
DR OrthoDB; 230201at2759; -.
DR Proteomes; UP000008827; Chromosome 10.
DR ExpressionAtlas; I1LEQ5; baseline and differential.
DR GO; GO:0005664; C:nuclear origin of replication recognition complex; IBA:GO_Central.
DR GO; GO:0003688; F:DNA replication origin binding; IBA:GO_Central.
DR GO; GO:0006270; P:DNA replication initiation; IBA:GO_Central.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR041664; AAA_16.
DR InterPro; IPR016527; ORC4.
DR InterPro; IPR032705; ORC4_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR12087; ORIGIN RECOGNITION COMPLEX SUBUNIT 4; 1.
DR PANTHER; PTHR12087:SF0; ORIGIN RECOGNITION COMPLEX SUBUNIT 4; 1.
DR Pfam; PF13191; AAA_16; 1.
DR Pfam; PF14629; ORC4_C; 1.
DR PIRSF; PIRSF007858; ORC4; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW DNA replication {ECO:0000256|ARBA:ARBA00022705,
KW ECO:0000256|PIRNR:PIRNR007858};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PIRNR:PIRNR007858};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PIRNR:PIRNR007858};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 42..168
FT /note="Orc1-like AAA ATPase"
FT /evidence="ECO:0000259|Pfam:PF13191"
FT DOMAIN 214..394
FT /note="Origin recognition complex subunit 4 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF14629"
SQ SEQUENCE 413 AA; 47385 MW; 237555627E9120DD CRC64;
MEQENHKIKA VSLLRSRICD PKFIFISESP ESNYSKLKFM ISSSVTEACN NSILLLGPRG
SGKNAVLELV IQDLLQEYPD SVSVIRLNGL LHSDDISAFK EIARQLCMEH QLLFSKAASF
DDNSQFMVAI LKECGLAHKT VIFVLDEFHL FAQGKQRLLY SLLDAMQSIT SQAVVLGISC
RLDADQLLEK RVRSRFSHRK LLFLPPSIED SQKLLMHILT LPIDSSFPHA YAVEFNRKVQ
NIIEDRRFKE TLNKYLNVDS SVKHLLRFLF CAVSHMDLQT GFLSRENFEI AFTSIQRQPK
LECLRNCSIL ELQILVCMKR LEVKEQSLCN FNSVMKEYIS TLTSERYARH VCLRAFEHLI
HRELICFTDN RGQSLSVEFR PVKLLISSAE LHQGLRANTS CPPKLLKLMD REG
//
