ID I1MTM7_SOYBN Unreviewed; 748 AA.
AC I1MTM7;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=Smr domain-containing protein {ECO:0000259|PROSITE:PS50828};
GN Name=100797731 {ECO:0000313|EnsemblPlants:KRH03385};
GN ORFNames=GLYMA_17G094300 {ECO:0000313|EMBL:KRH03385.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH03385.1};
RN [1] {ECO:0000313|EMBL:KRH03385.1, ECO:0000313|EnsemblPlants:KRH03385}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH03385};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH03385.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH03385}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH03385};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH03385.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH03385.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000850; KRH03385.1; -; Genomic_DNA.
DR AlphaFoldDB; I1MTM7; -.
DR EnsemblPlants; KRH03385; KRH03385; GLYMA_17G094300.
DR Gramene; KRH03385; KRH03385; GLYMA_17G094300.
DR HOGENOM; CLU_002706_49_5_1; -.
DR OMA; AHTHISK; -.
DR Proteomes; UP000008827; Chromosome 17.
DR ExpressionAtlas; I1MTM7; baseline and differential.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR002625; Smr_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 11.
DR PANTHER; PTHR47936:SF1; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN GUN1, CHLOROPLASTIC; 1.
DR PANTHER; PTHR47936; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 5.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 13.
DR PROSITE; PS50828; SMR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 135..169
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 170..204
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 205..240
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 241..275
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 276..310
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 311..345
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 346..380
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 381..415
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 416..450
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 451..485
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 486..520
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 521..555
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 556..590
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 708..748
FT /note="Smr"
FT /evidence="ECO:0000259|PROSITE:PS50828"
SQ SEQUENCE 748 AA; 84118 MW; F25319DE77D3982E CRC64;
MTITLSPSLS VPHPSPFSLT PTTTLRQLFF TNFTPSPRRR LQLQARAGKP NVLIPINPSV
AVEKGKYSYD VETLINRITA LPPRGSIARC LDPFKNKLSL NDFALVFKEF AQRGDWQRSL
RLFKYMQRQI WCKPNEHIYT IMITLLGREG LLDKCREVFD EMPSNGVART VYVYTAVINA
YGRNGQFHAS LELLNGMKQE RVSPSILTYN TVINACARGG LDWEGLLGLF AEMRHEGIQP
DVITYNTLLG ACAHRGLGDE AEMVFRTMNE SGIVPDINTY SYLVQTFGKL NRLEKVSELL
REMESGGNLP DITSYNVLLE AYAELGSIKE AMDVFRQMQA AGCVANAATY SVLLNLYGKH
GRYDDVRDIF LEMKVSNTDP DAGTYNILIQ VFGEGGYFKE VVTLFHDMVE ENVEPNMETY
EGLIFACGKG GLYEDAKKIL LHMNEKGIVP SSKAYTGVIE AFGQAALYEE ALVVFNTMNE
VGSNPTVETY NSFIHAFARG GLYKEAEAIL SRMNESGLKR DVHSFNGVIK AFRQGGQYEE
AVKSYVEMEK ANCEPNELTL EVVLSVYCSA GLVDESEEQF QEIKASGILP SVMCYCLMLA
LYAKNDRLND AYNLIDEMIT MRVSDIHQGI GQMIKGDFDD ESNWQIVEYV FDKLNSEGCG
LGMRFYNALL EALWWMFQRE RAARVLNEAS KRGLFPELFR KSKLVWSVDV HRMSEGGALT
ALSVWLNNMH EMSRTGNDLP ELATVVVV
//
