ID I1NA46_SOYBN Unreviewed; 811 AA.
AC I1NA46;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN Name=100794606 {ECO:0000313|EnsemblPlants:KRG95907};
GN ORFNames=GLYMA_19G177700 {ECO:0000313|EMBL:KRG95907.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRG95907.1};
RN [1] {ECO:0000313|EMBL:KRG95907.1, ECO:0000313|EnsemblPlants:KRG95907}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG95907};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG95907.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG95907}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG95907};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG95907.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG95907.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000852; KRG95907.1; -; Genomic_DNA.
DR RefSeq; XP_003554352.1; XM_003554304.3.
DR AlphaFoldDB; I1NA46; -.
DR SMR; I1NA46; -.
DR STRING; 3847.I1NA46; -.
DR PaxDb; 3847-GLYMA19G36140-1; -.
DR EnsemblPlants; KRG95907; KRG95907; GLYMA_19G177700.
DR GeneID; 100794606; -.
DR Gramene; KRG95907; KRG95907; GLYMA_19G177700.
DR KEGG; gmx:100794606; -.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; I1NA46; -.
DR OrthoDB; 35426at2759; -.
DR Proteomes; UP000008827; Chromosome 19.
DR ExpressionAtlas; I1NA46; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47932; ATPASE EXPRESSION PROTEIN 3; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR Pfam; PF17177; PPR_long; 1.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 202..321
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 294..324
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 333..367
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 368..402
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 512..546
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 547..581
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 582..619
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 14..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 811 AA; 91371 MW; DF17856256A98C1C CRC64;
MRDFVILGSS VVTPFSSSST PHHQHRHPIK PPHKPSLPKL APFSSNWNIS CALQAPLALS
HCADSKLVQE FEVVFEDFID SGVVDAELLA KVVLLGIRGK KVRSVIHALN KVQGRRISLS
THLNGSDIIA KECCRLVTCS HVEEAVELME VLARFQISIR ELVQPSDIIK RCVLSRNPIL
AVRYACLLPH AHILFCNIIS EFGKRRDLVS ALKAYEASKK HLNTPNMYIY RATIDTCGLC
RDYMKSRYIY EDLLNQKITP NIYVFNSLMN VNSHDLSYTL NLYQNMQNLG LKPDMTSYNI
LLKACCVAGR VDLAQDIYRE LKHLESVGQL KLDVFTYSTI IKVFADVKLW QMALKIKQDM
LSAGVSLNIV AWSSLINACA HAGLVEQAIQ LFEEMLLAGC EPNTQCFNII LNACVEAYQY
DRAFRFFHSW KGKKMLGSSG EGYNSNIGQG HMHDVTSIPN GISNSHILNF AERFPFTPTT
TTYNILLKAC GTDYYHAKAL IKEMETVGLS PNQISWSILI DICGASSNVE GAIEILKTMG
DAGIKPDVIA YTTAIKVCVE SKNFMQALTL YEEMKCYQIR PNWVTYNTLL KARSKYGFLH
EVQQCLAIYQ DMRKAGYKPN DYYLEELIEE WCEGVIQNNR EKQGEFSSSN KSESERPQSL
LLEKIAAHLL KRVADILAID VQGLTKVEAR LVVLAVLRMI KENYGLGHSV NDDILIIIGA
TKVDENPSKH ILEVQEAIIK LLRNELGLEV FPAKTRLALS DTANLEYPNF SNLSIEAQPG
ENALGFQTRR PGVLVRLKVT KKSLYRWLHR K
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