ID I1NEN3_SOYBN Unreviewed; 802 AA.
AC I1NEN3;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 68.
DE RecName: Full=EF-hand domain-containing protein {ECO:0000259|PROSITE:PS50222};
GN Name=100779385 {ECO:0000313|EnsemblPlants:KRG90336};
GN ORFNames=GLYMA_20G084100 {ECO:0000313|EMBL:KRG90336.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRG90336};
RN [1] {ECO:0000313|EMBL:KRG90336.1, ECO:0000313|EnsemblPlants:KRG90336}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG90336};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG90336.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG90336}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG90336};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG90336.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG90336.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000853; KRG90336.1; -; Genomic_DNA.
DR RefSeq; XP_003555744.1; XM_003555696.3.
DR AlphaFoldDB; I1NEN3; -.
DR SMR; I1NEN3; -.
DR STRING; 3847.I1NEN3; -.
DR PaxDb; 3847-GLYMA20G21270-1; -.
DR EnsemblPlants; KRG90336; KRG90336; GLYMA_20G084100.
DR GeneID; 100779385; -.
DR Gramene; KRG90336; KRG90336; GLYMA_20G084100.
DR KEGG; gmx:100779385; -.
DR eggNOG; KOG1124; Eukaryota.
DR HOGENOM; CLU_019072_0_0_1; -.
DR InParanoid; I1NEN3; -.
DR OMA; MYDDSEW; -.
DR OrthoDB; 1206025at2759; -.
DR Proteomes; UP000008827; Chromosome 20.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR Gene3D; 1.10.238.10; EF-hand; 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR011992; EF-hand-dom_pair.
DR InterPro; IPR002048; EF_hand_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR45081; EF HAND FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED; 1.
DR PANTHER; PTHR45081:SF1; EF HAND FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED; 1.
DR Pfam; PF13432; TPR_16; 3.
DR SMART; SM00028; TPR; 7.
DR SUPFAM; SSF47473; EF-hand; 2.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50222; EF_HAND_2; 1.
DR PROSITE; PS50005; TPR; 4.
DR PROSITE; PS50293; TPR_REGION; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT DOMAIN 6..41
FT /note="EF-hand"
FT /evidence="ECO:0000259|PROSITE:PS50222"
FT REPEAT 234..267
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 344..377
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 378..411
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 412..445
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
SQ SEQUENCE 802 AA; 89738 MW; 903CC9DFB27C4967 CRC64;
MATRGTRSEK VRRIFNQFDA NRDGGLNREE MALLVGAVNP RVKFSDEQIN AILDEVFRTY
GEFIDGDKGL TYEGLLRTYD DGAGDVDRDF DALGLDLVAA DAVKEPLAAS EASSSSIVDE
RITVETQKKQ RTAAWAVSPN HGIVFDDTWK IVDDLELLVK RLKVKQSKEG GKLKNDNFDA
YSDAGWSREL GPSAEISEKR VMWEESGHDY AVFLKELGGL RGRADGARSR EEAFDGHMAI
GRVLYEHQLF KEALVSFKRA CELQPVDVRP HFRAGNCLYV LVRYKEAKEE FLLALESAEA
GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY
RAAVKALEEA IFMKPDYADA HCDLASALHA MGEDERAIEV FQKAIDLKPG HVDALYNLGG
LYMDLGRFQR ASEMYTRVLA VWPNHWRALL NKAVSLLGAG ETEEAKRALK EALKMTNRVE
LHDAISHLKQ LQKKKTKPSN GGASGEASFV IVEPSKFKVV GEKTTARQEL ATALQIRALQ
RVTRLSRCSV ELLKKEMSER DVPVSYSGSG FPEKSIRKPS LEEILHRLLN FLKPETFQGA
VKAINERILS VLDENGSGRL DLGLFYAILA PICGGPPDRR KRVAFDALLW RPMNEDGANI
RKVDVTVYIK LLRAVYLPSQ GASELMEVRG DSDTSTVSFS EFLVMFDDPD WGFGIMPSLV
KLETGDRNRH GDVVCSVCRY PIIGSRFKEI KSHFSLCNQC YSEGKVPSSF KQEEYRFKEY
GSEGEAMKDK CMCFNLQSRN EK
//
