ID   I1Q9J7_ORYGL            Unreviewed;      1303 AA.
AC   I1Q9J7;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   27-MAR-2024, entry version 40.
DE   RecName: Full=alanine--tRNA ligase {ECO:0000256|ARBA:ARBA00013168};
DE            EC=6.1.1.7 {ECO:0000256|ARBA:ARBA00013168};
OS   Oryza glaberrima (African rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA07G0078900.1, ECO:0000313|Proteomes:UP000007306};
RN   [1] {ECO:0000313|Proteomes:UP000007306}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA   Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA   Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA   Zuccolo A.;
RT   "The complete genome of Oryza glaberrima.";
RL   Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ORGLA07G0078900.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC       {ECO:0000256|ARBA:ARBA00008226}.
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DR   STRING; 4538.I1Q9J7; -.
DR   EnsemblPlants; ORGLA07G0078900.1; ORGLA07G0078900.1; ORGLA07G0078900.
DR   Gramene; ORGLA07G0078900.1; ORGLA07G0078900.1; ORGLA07G0078900.
DR   eggNOG; KOG0188; Eukaryota.
DR   eggNOG; KOG2427; Eukaryota.
DR   HOGENOM; CLU_005216_0_0_1; -.
DR   OMA; GNTEEPY; -.
DR   Proteomes; UP000007306; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR   GO; GO:0004813; F:alanine-tRNA ligase activity; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:InterPro.
DR   GO; GO:1990380; F:K48-linked deubiquitinase activity; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
DR   CDD; cd00673; AlaRS_core; 1.
DR   Gene3D; 3.30.1640.10; mini-chromosome maintenance (MCM) complex, chain A, domain 1; 1.
DR   InterPro; IPR045864; aa-tRNA-synth_II/BPL/LPL.
DR   InterPro; IPR002318; Ala-tRNA-lgiase_IIc.
DR   InterPro; IPR018162; Ala-tRNA-ligase_IIc_anticod-bd.
DR   InterPro; IPR018165; Ala-tRNA-synth_IIc_core.
DR   InterPro; IPR018164; Ala-tRNA-synth_IIc_N.
DR   InterPro; IPR033979; MINDY_domain.
DR   PANTHER; PTHR11777:SF9; ALANINE--TRNA LIGASE, CYTOPLASMIC; 1.
DR   PANTHER; PTHR11777; ALANYL-TRNA SYNTHETASE; 1.
DR   Pfam; PF04424; MINDY_DUB; 1.
DR   Pfam; PF01411; tRNA-synt_2c; 1.
DR   PRINTS; PR00980; TRNASYNTHALA.
DR   SUPFAM; SSF55681; Class II aaRS and biotin synthetases; 1.
DR   SUPFAM; SSF101353; Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS); 1.
DR   PROSITE; PS50860; AA_TRNA_LIGASE_II_ALA; 1.
PE   3: Inferred from homology;
KW   Aminoacyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00023146};
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Ligase {ECO:0000256|ARBA:ARBA00022598};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   tRNA-binding {ECO:0000256|ARBA:ARBA00022555}.
FT   DOMAIN          1..415
FT                   /note="Alanyl-transfer RNA synthetases family profile"
FT                   /evidence="ECO:0000259|PROSITE:PS50860"
FT   REGION          665..697
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1172..1196
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1303 AA;  148272 MW;  FD98430B9E3CA22A CRC64;
     WPARVVRETF LSYFESKAHT RCSPSTILAA KDSPLLFADA EMNQFMPVLL GTAAQGSQLG
     CPGRACNSLR CIPVAVDDRH LTFTEVLGNW SFGDYFKEAI GFAWELLTKV YELEVDRIFV
     TYFGGDEKSG LAPDLESKHI WLKYLPSDKV LPLVNKGNFY QNGDTGPCGP CSQIYFDQIG
     HHDVASLLNN DDPGCIEIWN LVFFQFNKEA GGILMPSSAK HVGTGLNFEQ LTSILQKKKS
     KFDTDILMLT IDSIRQCTGN EIQPYSGKFG PDDINEVDLA YRIVADHIRT SSFAIADGSQ
     PGIEIARNML RRAIYFGHQN LKAKQRFLTI LVSAFIESMS GDFPELLHNE KKIKDIIAEE
     EITFAKDKKK FKKKDSKRQK KEKNNTEQNV VVTRPPKVSY KTRTIDFFGR PTHIIHQHEN
     GPCGLIAICN VLLLRSEIGL FLNKTEVMED DLLSRIISRL KRCSTNGFVF SPEYALFDYL
     EIPVFHRWLV DQDSELASAI ATSSYDELNL EVGEYISQKE AMGIKGRVEQ ISYFLQGPQL
     TAYGLSCLHK DLEEKKPCVL FWNNHWSTVI KFEEELYIFS FRFRFLIKXI RCCLAKVGRC
     MSLFTTNFCL IEMHVLMSKS WHIRXMGVVH LWIAPSHQLN MPVKEQASTL IRLVKFSNQE
     SADPQWWPQG LGGKNEWDHT GRNAPAGKEN TINPDIPIPY HEDLSAVEVV TEEQLPPAEI
     TDVILPQKVH SSSSTPEVAR SDQLKDAAAS QTPECSIQAV PYSTPISSPQ PLGRQIIAEE
     ERAQLLFGSF GCYDLKYWPS YPTVVCNSDV MAKSVPTVSN KRGFSSFVDK PLYISKASSE
     HRAQQSAFTN RFLEFLRGFG LGNTEEPYYK GTAASMVFLD LPMMDVKFDH IKIFDNELAL
     MICHDFERSR LDLNYAAKSF IMDFRSQLEG MFMKKFESFD NIIVRIDGLP KIDSLMSLEA
     FVKLPGNHFV EPRTLFATGS SLTVASGTRV GRIIATGVLQ EILKAHASRN SWNGSFKRKN
     ILVRNGCYSE ISMPFHAEFS RDSMLNDYVA YFDEVISLFE LKGVGCPAFF PWMRKSLLRF
     MPAPSPSFCD EFRHFQCFAM AQFALKRPVV RIGFLSNLYR LRRCANRQVR KTLLAILRSL
     SLRSDWRVIV LLHSHPILVK VYLFNKKKDK EGNGGGKTKE GNGENSKDQK GGEKTNDADY
     KMAKLTKYDN SANHLVIYTR HVIEHGMDPA QLESDDEVLE DEMYQLDDES IEMLSELDLL
     YSHYLDSQLN DMLEELFYSG MMTKELWQVF EEILDVRNMV EPL
//