ID I1ZDC8_9ACAR Unreviewed; 464 AA.
AC I1ZDC8;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 08-NOV-2023, entry version 30.
DE RecName: Full=Signal recognition particle 54 kDa protein {ECO:0000256|RuleBase:RU364034};
DE Flags: Fragment;
GN Name=Srp54k {ECO:0000313|EMBL:AFJ22259.1};
OS Proctophyllodes spini.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari;
OC Acariformes; Sarcoptiformes; Astigmata; Psoroptidia; Analgoidea;
OC Proctophyllodidae; Proctophyllodinae; Proctophyllodes.
OX NCBI_TaxID=474270 {ECO:0000313|EMBL:AFJ22259.1};
RN [1] {ECO:0000313|EMBL:AFJ22259.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23417682; DOI=10.1093/sysbio/syt008;
RA Klimov P.B., OConnor B.;
RT "Is permanent parasitism reversible?--critical evidence from early
RT evolution of house dust mites.";
RL Syst. Biol. 62:411-423(2013).
RN [2] {ECO:0000313|EMBL:AOO33836.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=AD772 {ECO:0000313|EMBL:AOO33836.1};
RA Klimov P.B., Mironov S.V., OConnor B.M.;
RT "Detecting ancient co-dispersals and host shifts by double dating of host
RT and parasite phylogenies: application in proctophyllodid feather mites
RT associated with passerine birds.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the signal recognition particle (SRP) complex, a
CC ribonucleoprotein complex that mediates the cotranslational targeting
CC of secretory and membrane proteins to the endoplasmic reticulum (ER).
CC {ECO:0000256|RuleBase:RU364034}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=GTP + H2O = GDP + H(+) + phosphate; Xref=Rhea:RHEA:19669,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:37565,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:58189; EC=3.6.5.4;
CC Evidence={ECO:0000256|ARBA:ARBA00035589};
CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:19670;
CC Evidence={ECO:0000256|ARBA:ARBA00035589};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496,
CC ECO:0000256|RuleBase:RU364034}. Endoplasmic reticulum
CC {ECO:0000256|ARBA:ARBA00004240}.
CC -!- DOMAIN: The M domain binds the 7SL RNA in presence of SRP19 and binds
CC the signal sequence of presecretory proteins.
CC {ECO:0000256|RuleBase:RU364034}.
CC -!- DOMAIN: The NG domain, also named G domain, is a special guanosine
CC triphosphatase (GTPase) domain, which binds GTP and forms a guanosine
CC 5'-triphosphate (GTP)-dependent complex with a homologous NG domain in
CC the SRP receptor subunit SRPRA. The two NG domains undergo cooperative
CC rearrangements upon their assembly, which culminate in the reciprocal
CC activation of the GTPase activity of one another. SRP receptor
CC compaction upon binding with cargo-loaded SRP and GTPase rearrangement
CC drive SRP-mediated cotranslational protein translocation into the ER.
CC {ECO:0000256|RuleBase:RU364034}.
CC -!- SIMILARITY: Belongs to the GTP-binding SRP family. SRP54 subfamily.
CC {ECO:0000256|ARBA:ARBA00005450, ECO:0000256|RuleBase:RU364034}.
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DR EMBL; JQ001208; AFJ22259.1; -; Genomic_DNA.
DR EMBL; KU203030; AOO33836.1; -; Genomic_DNA.
DR AlphaFoldDB; I1ZDC8; -.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
DR GO; GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-UniRule.
DR GO; GO:0008312; F:7S RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:UniProtKB-UniRule.
DR CDD; cd17875; SRP54_G; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.20.120.140; Signal recognition particle SRP54, nucleotide-binding domain; 1.
DR Gene3D; 1.10.260.30; Signal recognition particle, SRP54 subunit, M-domain; 1.
DR HAMAP; MF_00306; SRP54; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR036891; Signal_recog_part_SRP54_M_sf.
DR InterPro; IPR013822; Signal_recog_particl_SRP54_hlx.
DR InterPro; IPR004125; Signal_recog_particle_SRP54_M.
DR InterPro; IPR022941; SRP54.
DR InterPro; IPR006325; SRP54_euk.
DR InterPro; IPR000897; SRP54_GTPase_dom.
DR InterPro; IPR042101; SRP54_N_sf.
DR NCBIfam; TIGR01425; SRP54_euk; 1.
DR PANTHER; PTHR11564:SF5; SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN; 1.
DR PANTHER; PTHR11564; SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54; 1.
DR Pfam; PF00448; SRP54; 1.
DR Pfam; PF02881; SRP54_N; 1.
DR Pfam; PF02978; SRP_SPB; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00962; SRP54; 1.
DR SMART; SM00963; SRP54_N; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF47446; Signal peptide-binding domain; 1.
DR PROSITE; PS00300; SRP54; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|RuleBase:RU364034};
KW Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00022824};
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134, ECO:0000256|RuleBase:RU364034};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU364034};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|RuleBase:RU364034};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU364034};
KW Signal recognition particle {ECO:0000256|ARBA:ARBA00023135,
KW ECO:0000256|RuleBase:RU364034}.
FT DOMAIN 262..275
FT /note="SRP54-type proteins GTP-binding"
FT /evidence="ECO:0000259|PROSITE:PS00300"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AFJ22259.1"
FT NON_TER 464
FT /evidence="ECO:0000313|EMBL:AFJ22259.1"
SQ SEQUENCE 464 AA; 51418 MW; 4C94ADB792295FC6 CRC64;
RKITTALRSL GNATIINQEV LDSLLKEICT ALIESDVNIM LVKQLRENVR SVIDFDEMAA
GLNKRRMIMM AVFKELVKLL DPGVKVWQPV KGKTNVIMFV GLQGIGKTTT CTKMAYYYMK
KGWKCALVCA DTFRAGAFDQ LKQNATKARI PFYGSYTESD PVVIASEGVE KFTKENFEII
IVDTSGRHKQ ESSLFEEMLA IQAAIQPNLV IYVMDASIGQ ACEAQAKAFK NKVDVGAIIV
TKLDGHAKGG GALSAVAATK SPIIFIGTGE HIDEFEPFKV KPFISKLLGM GDIEGLIDKV
NELKLDDNEE LIEKLKHGEF TIRDMYEQLT NIMKMGPFNQ ILNMIPGFGA ELAKCASEAE
SMSRLKRMMT IMDSMSDSEL DSREGAKLFS KQPTRLIRVS RGAGVTQREV QELLSQYTKF
AAVVKKMGGI KGLFKTGDLA KNVNSAQMLK LNHQMAKMID PRVL
//
