ID I2JMD5_9GAMM Unreviewed; 54 AA.
AC I2JMD5;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE RecName: Full=Rubredoxin {ECO:0000256|PIRNR:PIRNR000071};
GN ORFNames=DOK_05260 {ECO:0000313|EMBL:EIF44137.1};
OS gamma proteobacterium BDW918.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales;
OC Spongiibacteraceae.
OX NCBI_TaxID=1168065 {ECO:0000313|EMBL:EIF44137.1, ECO:0000313|Proteomes:UP000003473};
RN [1] {ECO:0000313|EMBL:EIF44137.1, ECO:0000313|Proteomes:UP000003473}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BDW918 {ECO:0000313|EMBL:EIF44137.1,
RC ECO:0000313|Proteomes:UP000003473};
RX PubMed=22740675; DOI=10.1128/JB.00678-12;
RA Kim S.M., Cho S.J., Lee S.B.;
RT "Genome Sequence of the Unclassified Marine Gammaproteobacterium BDW918.";
RL J. Bacteriol. 194:3753-3754(2012).
CC -!- COFACTOR:
CC Name=Fe(3+); Xref=ChEBI:CHEBI:29034;
CC Evidence={ECO:0000256|PIRNR:PIRNR000071,
CC ECO:0000256|PIRSR:PIRSR000071-1};
CC Note=Binds 1 Fe(3+) ion per subunit. {ECO:0000256|PIRNR:PIRNR000071,
CC ECO:0000256|PIRSR:PIRSR000071-1};
CC -!- SIMILARITY: Belongs to the rubredoxin family.
CC {ECO:0000256|ARBA:ARBA00005337, ECO:0000256|PIRNR:PIRNR000071}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIF44137.1}.
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DR EMBL; AJMK01000024; EIF44137.1; -; Genomic_DNA.
DR AlphaFoldDB; I2JMD5; -.
DR eggNOG; COG1773; Bacteria.
DR HOGENOM; CLU_128747_1_1_6; -.
DR OrthoDB; 9808980at2; -.
DR Proteomes; UP000003473; Unassembled WGS sequence.
DR GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR CDD; cd00730; rubredoxin; 1.
DR Gene3D; 2.20.28.10; -; 1.
DR InterPro; IPR024922; Rubredoxin.
DR InterPro; IPR024934; Rubredoxin-like_dom.
DR InterPro; IPR024935; Rubredoxin_dom.
DR PANTHER; PTHR47627; RUBREDOXIN; 1.
DR PANTHER; PTHR47627:SF1; RUBREDOXIN-1-RELATED; 1.
DR Pfam; PF00301; Rubredoxin; 1.
DR PIRSF; PIRSF000071; Rubredoxin; 1.
DR PRINTS; PR00163; RUBREDOXIN.
DR SUPFAM; SSF57802; Rubredoxin-like; 1.
DR PROSITE; PS50903; RUBREDOXIN_LIKE; 1.
PE 3: Inferred from homology;
KW Electron transport {ECO:0000256|ARBA:ARBA00022982,
KW ECO:0000256|PIRNR:PIRNR000071};
KW Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|PIRNR:PIRNR000071};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|PIRNR:PIRNR000071};
KW Reference proteome {ECO:0000313|Proteomes:UP000003473};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|PIRNR:PIRNR000071}.
FT DOMAIN 2..53
FT /note="Rubredoxin-like"
FT /evidence="ECO:0000259|PROSITE:PS50903"
FT BINDING 7
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000256|PIRSR:PIRSR000071-1"
FT BINDING 10
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000256|PIRSR:PIRSR000071-1"
FT BINDING 40
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000256|PIRSR:PIRSR000071-1"
FT BINDING 43
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000256|PIRSR:PIRSR000071-1"
SQ SEQUENCE 54 AA; 6186 MW; 39CACC05AF30238F CRC64;
MLKKYECIVC GFIYDEEIGI PDDGIVAGTK WDDIPESWTC YECSAPKSDF ENME
//