ID I2QDI2_9BRAD Unreviewed; 473 AA.
AC I2QDI2;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE SubName: Full=UbiD family decarboxylase {ECO:0000313|EMBL:EIG57838.1};
GN ORFNames=Bra1253DRAFT_02511 {ECO:0000313|EMBL:EIG57838.1};
OS Bradyrhizobium sp. WSM1253.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=319003 {ECO:0000313|EMBL:EIG57838.1, ECO:0000313|Proteomes:UP000005125};
RN [1] {ECO:0000313|EMBL:EIG57838.1, ECO:0000313|Proteomes:UP000005125}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WSM1253 {ECO:0000313|EMBL:EIG57838.1,
RC ECO:0000313|Proteomes:UP000005125};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Pagani I., Brau L., Yates R., O'Hara G., Rui T.,
RA Howieson J., Reeve W., Woyke T.;
RT "Improved High-Quality Draft sequence of Bradyrhizobium sp. WSM1253.";
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000005125}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WSM1253 {ECO:0000313|Proteomes:UP000005125};
RX PubMed=26629308;
RA Tiwari R., Howieson J., Yates R., Tian R., Held B., Tapia R., Han C.,
RA Seshadri R., Reddy T.B., Huntemann M., Pati A., Woyke T., Markowitz V.,
RA Ivanova N., Kyrpides N., Reeve W.;
RT "Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of
RT Ornithopus compressus from the Greek Island of Sifnos.";
RL Stand. Genomic Sci. 10:113-113(2015).
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DR EMBL; JH600073; EIG57838.1; -; Genomic_DNA.
DR RefSeq; WP_007594265.1; NZ_JH600073.1.
DR AlphaFoldDB; I2QDI2; -.
DR eggNOG; COG0043; Bacteria.
DR HOGENOM; CLU_023348_5_1_5; -.
DR OrthoDB; 9809841at2; -.
DR Proteomes; UP000005125; Unassembled WGS sequence.
DR GO; GO:0016831; F:carboxy-lyase activity; IEA:InterPro.
DR Gene3D; 3.40.1670.10; UbiD C-terminal domain-like; 1.
DR InterPro; IPR002830; UbiD.
DR InterPro; IPR049381; UbiD-like_C.
DR InterPro; IPR049383; UbiD-like_N.
DR InterPro; IPR048304; UbiD_Rift_dom.
DR NCBIfam; TIGR00148; UbiD family decarboxylase; 1.
DR PANTHER; PTHR30108; 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE-RELATED; 1.
DR PANTHER; PTHR30108:SF17; FERULIC ACID DECARBOXYLASE 1; 1.
DR Pfam; PF01977; UbiD; 1.
DR Pfam; PF20696; UbiD_C; 1.
DR Pfam; PF20695; UbiD_N; 1.
DR SUPFAM; SSF50475; FMN-binding split barrel; 1.
DR SUPFAM; SSF143968; UbiD C-terminal domain-like; 1.
PE 4: Predicted;
FT DOMAIN 22..96
FT /note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like N-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF20695"
FT DOMAIN 108..301
FT /note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase-likw
FT Rift-related"
FT /evidence="ECO:0000259|Pfam:PF01977"
FT DOMAIN 307..428
FT /note="3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF20696"
SQ SEQUENCE 473 AA; 51181 MW; 222ECE25FE3D0FCC CRC64;
MRMENVASKG VSSPADLRTW LAYLAERGRL AIAREGIGLA DELAAIAKRL ERDSAVLFPR
PDGHEIPVVA NLFAGRDWVA ESIGVTEDQL LPRFLAAASN PLPTHEVASG PVQEVVHDEV
DLLRQLPVPK HNERDSGPYI TAGLLIARNP KTGVQNVSIH RCQISGKNHI GVLLLPRHTF
SYYRMAEELG QALEIAIVIG AHPALLLASQ AIAALDEDEM AIAGALLGSP VDVVKCRTNS
VRVPAHAEIV IEGRILQGVR EPEGPFGEFP QYYGPRANRE VIEVDAITHR KAPIFHTIVG
GGFEHLILGG VPREATLLQH LRRSFPNVID VRLTRGGTCR YHLAIRVDKT NDGEPKNIMM
CAFGAHYDIK QVVVVDKDVD ISSSEEIEWA VATRFQADRD LMVVAGALGS KLDPTTDNGI
SAKMGLDATA PVSAPELAFK RIRVKGEEEV DLATALQADP GVAIARLLAE AGT
//
