UniProt: I3M0L5

Database: UniProt
Entry: I3M0L5_ICTTR

LinkDB:  I3M0L5_ICTTR 
Original site:  I3M0L5_ICTTR

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Ontology (4)   
   GO (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Gene (3)   
   ENSEMBL-UP (3)   
DNA sequence (10)   
   EMBL (10)   
Protein domain (10)   
   InterPro (7)   
   Pfam (2)   
   SMART (1)   
All databases (28)   

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ID   I3M0L5_ICTTR            Unreviewed;       665 AA.
AC   I3M0L5;
DT   11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 2.
DT   27-MAR-2024, entry version 60.
DE   RecName: Full=1,4-alpha-glucan branching enzyme {ECO:0000256|ARBA:ARBA00012541};
DE            EC=2.4.1.18 {ECO:0000256|ARBA:ARBA00012541};
GN   Name=GBE1 {ECO:0000313|Ensembl:ENSSTOP00000002263.3};
OS   Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus
OS   tridecemlineatus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae;
OC   Xerinae; Marmotini; Ictidomys.
OX   NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000002263.3, ECO:0000313|Proteomes:UP000005215};
RN   [1] {ECO:0000313|Proteomes:UP000005215}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG   The Broad Institute Genome Assembly & Analysis Group;
RG   Computational R&D Group;
RG   and Sequencing Platform;
RA   Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA   MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
RT   "The Draft Genome of Spermophilus tridecemlineatus.";
RL   Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSSTOP00000002263.3}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Transfers a segment of a (1->4)-alpha-D-glucan chain to a
CC         primary hydroxy group in a similar glucan chain.; EC=2.4.1.18;
CC         Evidence={ECO:0000256|ARBA:ARBA00000826};
CC   -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family. GlgB
CC       subfamily. {ECO:0000256|ARBA:ARBA00009000}.
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DR   EMBL; AGTP01033271; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033272; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033273; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033274; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033275; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033276; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033277; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033278; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033279; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01033280; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; I3M0L5; -.
DR   Ensembl; ENSSTOT00000002530.3; ENSSTOP00000002263.3; ENSSTOG00000002532.3.
DR   GeneTree; ENSGT00390000017040; -.
DR   HOGENOM; CLU_011131_0_0_1; -.
DR   TreeFam; TF300783; -.
DR   Proteomes; UP000005215; Unassembled WGS sequence.
DR   GO; GO:0003844; F:1,4-alpha-glucan branching enzyme activity; IEA:UniProtKB-EC.
DR   GO; GO:0102752; F:1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis); IEA:UniProtKB-EC.
DR   GO; GO:0043169; F:cation binding; IEA:InterPro.
DR   GO; GO:0005978; P:glycogen biosynthetic process; IEA:InterPro.
DR   CDD; cd11321; AmyAc_bac_euk_BE; 1.
DR   Gene3D; 3.20.20.80; Glycosidases; 1.
DR   Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 2.
DR   InterPro; IPR006048; A-amylase/branching_C.
DR   InterPro; IPR037439; Branching_enzy.
DR   InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR   InterPro; IPR013780; Glyco_hydro_b.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR014756; Ig_E-set.
DR   PANTHER; PTHR43651; 1,4-ALPHA-GLUCAN-BRANCHING ENZYME; 1.
DR   PANTHER; PTHR43651:SF3; 1,4-ALPHA-GLUCAN-BRANCHING ENZYME; 1.
DR   Pfam; PF00128; Alpha-amylase; 1.
DR   Pfam; PF02806; Alpha-amylase_C; 1.
DR   PIRSF; PIRSF000463; GlgB; 2.
DR   SMART; SM00642; Aamy; 1.
DR   SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR   SUPFAM; SSF81296; E set domains; 1.
DR   SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000005215};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          185..531
FT                   /note="Glycosyl hydrolase family 13 catalytic"
FT                   /evidence="ECO:0000259|SMART:SM00642"
FT   ACT_SITE        320
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000463-1"
FT   ACT_SITE        375
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000463-1"
SQ   SEQUENCE   665 AA;  75735 MW;  84F50BF32DF06ACB CRC64;
     MAAPAGSATP AAPAKGSEAA LAAALADVPE LARLLEVDPY LKPFAEDFQR RYKKFSQILS
     DIGENEGGID KFSRGYESFG IHRCADGGLY CKEWAPGAEG VFLTGDFIIT SKSGEILYRI
     SPWAKYVARE GGNVNYDWIC WDPEHPYKFK HSRPKKPKSV RIYESHVGIS SHEGKIASYK
     HFTCNVLPRI KDLGYNCIQL MAIMEHAYYA SFGYQITSFF AASSRYGTPE ELKELVDTAH
     SMGITVLLDV VHSHASKNSE DGLNMFDGTD SCYFHSGPRG THDLWDSKLF AYSNWEVLRF
     LLSNIRWWLE EYCFDGFRFD GVTSMLYHHH GMGQSFSGDY NEYFGLQVDE DALTYLMLAN
     HLIHTLYPDS ITIAEDVSGM PALCSPISQG GGGFDYRLAM AIPDKWIQLI KEFKDEDWNM
     GNIVYTLTNR RYLEKCIAYA ESHDQALVGD KTLAFWLMDA EMYTNMSVLA PFTPVIDRGI
     QLHKMIRLIT HALGGEGYLN FMGNEFGHPE WLDFPRKGNN ESYHYARRQF HLTDDDLLRY
     KFLNNFDRDM NRLEERCGWL SAPQAFVSEK HEGNKIIAFE RAGLLFIFNF HPNKSYTDYR
     VGTALPGKFK IVLDSDAAEY GGHQRLDHNT DFFSEPLEHN GRHYSLLVYI PSRVALILQN
     VDLPN
//

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