ID I3MD08_ICTTR Unreviewed; 318 AA.
AC I3MD08;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 2.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=Mortality factor 4-like protein 1 pseudogene {ECO:0000313|Ensembl:ENSSTOP00000008205.3};
GN Name=LOC101965369 {ECO:0000313|Ensembl:ENSSTOP00000008205.3};
OS Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus
OS tridecemlineatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae;
OC Xerinae; Marmotini; Ictidomys.
OX NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000008205.3, ECO:0000313|Proteomes:UP000005215};
RN [1] {ECO:0000313|Proteomes:UP000005215}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG The Broad Institute Genome Assembly & Analysis Group;
RG Computational R&D Group;
RG and Sequencing Platform;
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
RT "The Draft Genome of Spermophilus tridecemlineatus.";
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSSTOP00000008205.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; AGTP01083930; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; I3MD08; -.
DR STRING; 43179.ENSSTOP00000008205; -.
DR Ensembl; ENSSTOT00000009151.3; ENSSTOP00000008205.3; ENSSTOG00000009157.3.
DR GeneTree; ENSGT00950000182965; -.
DR HOGENOM; CLU_105220_0_0_1; -.
DR InParanoid; I3MD08; -.
DR TreeFam; TF323400; -.
DR Proteomes; UP000005215; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd18983; CBD_MSL3_like; 1.
DR Gene3D; 2.30.30.140; -; 1.
DR Gene3D; 1.10.274.30; MRG domain; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR008676; MRG.
DR InterPro; IPR038217; MRG_C_sf.
DR InterPro; IPR026541; MRG_dom.
DR InterPro; IPR025995; Tudor-knot.
DR PANTHER; PTHR10880; MORTALITY FACTOR 4-LIKE PROTEIN; 1.
DR PANTHER; PTHR10880:SF29; MORTALITY FACTOR 4-LIKE PROTEIN 1; 1.
DR Pfam; PF05712; MRG; 1.
DR Pfam; PF11717; Tudor-knot; 1.
DR PIRSF; PIRSF038133; HAT_Nua4_EAF3/MRG15; 1.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR PROSITE; PS51640; MRG; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000005215};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..78
FT /note="Chromo"
FT /evidence="ECO:0000259|SMART:SM00298"
FT REGION 77..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 115..131
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 318 AA; 36545 MW; 93CE6AF9AE284C3B CRC64;
MAPKQDPKPK FQEGERVLCF RGPLLYEAKC VKVAIKDKQV KYFTHYSGWN KNWDEWVPES
RVLKYVDTNL QKQRELQKAN QEQYAEGKMR GAASGKKTSG LQQKNMEVKT KKNKQKTPGN
GGGGSTSETP QPPRKKRARV DPTVENEETF MNRVEVKVKI SEELKPRLVD DWDLITRQKQ
LFCLPAKKNV DSILEDYANY KKSQIEYAVN EVVAGIKEYF NVMLGTQLLY KFERPQYAEI
LADHPDAPMS QVYGAPHLLR LFVRTGAMLA YTPLDEKSLA LLLNYLHDFL KYLAKNSATL
FSASDYEVAP PEYHRKAV
//
