ID I4VWI1_9GAMM Unreviewed; 799 AA.
AC I4VWI1;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403};
DE EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};
GN ORFNames=UU9_03902 {ECO:0000313|EMBL:EIL91572.1};
OS Rhodanobacter fulvus Jip2.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Rhodanobacteraceae; Rhodanobacter.
OX NCBI_TaxID=1163408 {ECO:0000313|EMBL:EIL91572.1, ECO:0000313|Proteomes:UP000004210};
RN [1] {ECO:0000313|EMBL:EIL91572.1, ECO:0000313|Proteomes:UP000004210}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Jip2T {ECO:0000313|Proteomes:UP000004210};
RX PubMed=22843592; DOI=10.1128/JB.00871-12;
RA Kostka J.E., Green S.J., Rishishwar L., Prakash O., Katz L.S.,
RA Marino-Ramirez L., Jordan I.K., Munk C., Ivanova N., Mikhailova N.,
RA Watson D.B., Brown S.D., Palumbo A.V., Brooks S.C.;
RT "Genome sequences for six rhodanobacter strains, isolated from soils and
RT the terrestrial subsurface, with variable denitrification capabilities.";
RL J. Bacteriol. 194:4461-4462(2012).
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964,
CC ECO:0000256|HAMAP-Rule:MF_01403};
CC -!- SIMILARITY: Belongs to the XFP family. {ECO:0000256|ARBA:ARBA00005623,
CC ECO:0000256|HAMAP-Rule:MF_01403}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIL91572.1}.
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DR EMBL; AJXU01000018; EIL91572.1; -; Genomic_DNA.
DR RefSeq; WP_007080421.1; NZ_AJXU01000018.1.
DR AlphaFoldDB; I4VWI1; -.
DR STRING; 1163408.UU9_03902; -.
DR PATRIC; fig|1163408.3.peg.800; -.
DR eggNOG; COG3957; Bacteria.
DR OrthoDB; 9768449at2; -.
DR Proteomes; UP000004210; Unassembled WGS sequence.
DR GO; GO:0016832; F:aldehyde-lyase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd02011; TPP_PK; 1.
DR Gene3D; 3.40.50.920; -; 1.
DR Gene3D; 3.40.50.970; -; 2.
DR HAMAP; MF_01403; Phosphoketolase; 1.
DR InterPro; IPR023962; Phosphoketolase.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR009014; Transketo_C/PFOR_II.
DR InterPro; IPR005593; Xul5P/Fru6P_PKetolase.
DR InterPro; IPR018969; Xul5P/Fru6P_PKetolase_C.
DR InterPro; IPR019790; Xul5P/Fru6P_PKetolase_CS.
DR InterPro; IPR018970; Xul5P/Fru6P_PKetolase_N.
DR InterPro; IPR019789; Xul5P/Fru6P_PKetolase_ThDP_BS.
DR PANTHER; PTHR31273; PHOSPHOKETOLASE-RELATED; 1.
DR PANTHER; PTHR31273:SF0; PHOSPHOKETOLASE-RELATED; 1.
DR Pfam; PF03894; XFP; 1.
DR Pfam; PF09363; XFP_C; 1.
DR Pfam; PF09364; XFP_N; 1.
DR PIRSF; PIRSF017245; Phosphoketolase; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
DR PROSITE; PS60002; PHOSPHOKETOLASE_1; 1.
DR PROSITE; PS60003; PHOSPHOKETOLASE_2; 1.
PE 3: Inferred from homology;
KW Lyase {ECO:0000256|ARBA:ARBA00023239, ECO:0000256|HAMAP-Rule:MF_01403};
KW Reference proteome {ECO:0000313|Proteomes:UP000004210};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052, ECO:0000256|HAMAP-
KW Rule:MF_01403}.
FT DOMAIN 11..372
FT /note="Xylulose 5-phosphate/Fructose 6-phosphate
FT phosphoketolase N-terminal"
FT /evidence="ECO:0000259|Pfam:PF09364"
FT DOMAIN 589..790
FT /note="Xylulose 5-phosphate/Fructose 6-phosphate
FT phosphoketolase C-terminal"
FT /evidence="ECO:0000259|Pfam:PF09363"
SQ SEQUENCE 799 AA; 89039 MW; A2170F32915D395F CRC64;
MIDLPDQQPV DASQLRAIDA WWRAANYLSV GQIYLRANPL LRQPLAPAHI KRMLLGHWGT
TPGQNFIYAH LNRAIRQYDL DMVYLSGPGH GGPAVVANAW LEGTYSEVYP QVSQDEAGLQ
RLFKQFSFPG GIPSHASPEC PGSMHEGGEL GYSLSHAFGA VFDNPGLIAA CVIGDGEAET
GPLATAWHSN KFLDPVGDGA VLPILHLNGY KIANPAVLAR IGREELEQLL RGYGWMPYFV
VGSDPVAMHQ AMAAALDAAV VQISQIQRDA REGGACTRPR WPMIVLESPK GWTGPAMVDG
RPNEGTFRAH QVPLSISPTS PPEHLPQLEA WLRSYRPEQL FDERGRLRPE WAALAPSGAR
RMSANPHSNG GLLLRDLLLP DFRDYAVAAP QPGARGNGDT RALGPFLRDV IRLNEPSRNF
RVFGPDETIS NGLAAVFEAT NRQWQAALKP DDEFLAPQGR VVEMLSEHQC EGWLEGYLLT
GRHGLFNCYE AFIHIVDSMF NQHAKWLKMT AAIPWRRPLA SLNYLLASHV WRQDHNGFTH
QDPGFIDHVV NKKASIVRVY LPPDANCLLS VMDHCLRSRH YVNVVVAGKH PAPQWLPMDA
AASHCAQGIG LWPWASSDAH GEPDVVMACA GDVPTLETLA AVSILRRYLP DLKLRVVNVV
DLMKLQAPSE HPHGLDDDDF DQLFTRDKPV IFAYHGYPSL IHRLTYRRAN HDNLHVHGYR
EEGTITTAFD MTVLNELDRF HLVIDVINRV PQAGERGVYL KQKLLDKLIE HKHYIDEHGE
DLPEIRHWMW DAPEAGTLD
//
