ID I5C8C4_9BACT Unreviewed; 488 AA.
AC I5C8C4;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 22-FEB-2023, entry version 37.
DE SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EIM78076.1};
GN ORFNames=A3SI_04707 {ECO:0000313|EMBL:EIM78076.1};
OS Nitritalea halalkaliphila LW7.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC Nitritalea.
OX NCBI_TaxID=1189621 {ECO:0000313|EMBL:EIM78076.1, ECO:0000313|Proteomes:UP000005551};
RN [1] {ECO:0000313|EMBL:EIM78076.1, ECO:0000313|Proteomes:UP000005551}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LW7 {ECO:0000313|EMBL:EIM78076.1,
RC ECO:0000313|Proteomes:UP000005551};
RA Jangir P.K., Singh A., Shivaji S., Sharma R.;
RT "Genome sequence of Nitritalea halalkaliphila LW7.";
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIM78076.1}.
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DR EMBL; AJYA01000009; EIM78076.1; -; Genomic_DNA.
DR RefSeq; WP_009053719.1; NZ_AJYA01000009.1.
DR AlphaFoldDB; I5C8C4; -.
DR STRING; 1189621.A3SI_04707; -.
DR PATRIC; fig|1189621.3.peg.975; -.
DR OrthoDB; 833147at2; -.
DR Proteomes; UP000005551; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF1; METHYLPHOSPHONATE SYNTHASE; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000005551}.
FT DOMAIN 14..68
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 488 AA; 56632 MW; 2E2646BA0C58D34C CRC64;
MKEEHIRIIF GLKIKQLRKD KHLSLQELSE KSGISISYLN EIEKSKKYPK ADKIFKLAEA
LQVSYDYLVS LQLDDKMKTI SDLLQSDILS ELPLDIFGID VATFIELLSD APSKLNAFII
TLMDISRAYD ISKEEFFLSA LRAYQEMHDN YFPDLEQAAE KLKKQFGLEK PSVQRLEEIL
ETAYQYQIDA YDFDEDPELK GLRSIVLPGK APRLLFNRNL TENQKLFTLG RELGHCFLSL
ENRPLSYSWV SVHSFEEVLN HFKASYFSCA LLIPEKGFVK DLEHFLYQPT LEASRLLQLI
EKYTVTPETL IYRLTNVLPK HFGLKELFFL RISKNTETKN FSLNKELHLT GIHHPHASKG
QEDYCRRWVS ATIFDDFERS GERVVGKGQF SFYPDGDSYF VFAIAYRAGM NAKEHVSISF
GLKANALFKR KVKFHNDQNI PLRYVGTTCQ RCPVENCEVR VAAPKFLLEA QRKEAKRQAM
ERLKKQML
//
