ID J2DA54_9SPHN Unreviewed; 189 AA.
AC J2DA54;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=Cold shock protein {ECO:0000313|EMBL:EJK79537.1};
DE Flags: Fragment;
GN ORFNames=PMI04_03795 {ECO:0000313|EMBL:EJK79537.1};
OS Sphingobium sp. AP49.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1144307 {ECO:0000313|EMBL:EJK79537.1};
RN [1] {ECO:0000313|EMBL:EJK79537.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP49 {ECO:0000313|EMBL:EJK79537.1};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000408}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK79537.1}.
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DR EMBL; AJVL01000077; EJK79537.1; -; Genomic_DNA.
DR AlphaFoldDB; J2DA54; -.
DR STRING; 1144307.PMI04_03795; -.
DR PATRIC; fig|1144307.3.peg.3543; -.
DR eggNOG; COG1278; Bacteria.
DR OrthoDB; 9791685at2; -.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 2.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF60; LD37574P; 1.
DR Pfam; PF00313; CSD; 2.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 2.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 2.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 2.
PE 4: Predicted;
FT DOMAIN 15..80
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 120..186
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 81..119
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EJK79537.1"
SQ SEQUENCE 189 AA; 19882 MW; F60A38FBA8BE43DE CRC64;
GGGGGRGMPA QVVGEGKGVV KFFNGQKGFG FIVREDGGED VFVHISAVEQ AGLTGLAEGQ
PLGFTLVDRG GKVSATDLVI DGEPLPVTDR GPPREPREPR AGGFGGAPER GPQRQLTGER
ASGTVKFFNA MKGFGFIQRD DGQPDAFVHI SAVERAGMAA LNEGDRLDFE LEVDRRGKYA
AVNLQNKAD
//
