ID J2L9L8_9SPHN Unreviewed; 349 AA.
AC J2L9L8;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EJK84116.1};
GN ORFNames=PMI04_01567 {ECO:0000313|EMBL:EJK84116.1};
OS Sphingobium sp. AP49.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1144307 {ECO:0000313|EMBL:EJK84116.1};
RN [1] {ECO:0000313|EMBL:EJK84116.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP49 {ECO:0000313|EMBL:EJK84116.1};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK84116.1}.
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DR EMBL; AJVL01000031; EJK84116.1; -; Genomic_DNA.
DR RefSeq; WP_007708550.1; NZ_CP124576.1.
DR AlphaFoldDB; J2L9L8; -.
DR STRING; 1144307.PMI04_01567; -.
DR PATRIC; fig|1144307.3.peg.1519; -.
DR eggNOG; COG1609; Bacteria.
DR OrthoDB; 7185860at2; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd01545; PBP1_SalR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF138; HTH-TYPE TRANSCRIPTIONAL REGULATOR KDGR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00036; HTHLACI.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 14..68
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 349 AA; 37945 MW; 94D8D5B0A4771C30 CRC64;
MTKTPRDEGA TAKLTINDIA RMAGVSKKTV SRVINRSPLL NQETRGKVEE IIRQTGYVPN
PQARALALGR NFLIGLIYDN PNAQMVLSMQ KGILEALHGT EFELVVRPVD RGAAMVMEDI
HNFVTRQRLF GVVVLPPLSE NDHLSKLFDD AGCRYVRMGS ALLDDPEHMV ASNDRDAVAD
AVRYLIAQGH RRIGLIAGPH GFRSAKERRE GFEMALAEAG ISLPRSLVAD GQYTFESGVS
ASENLFDLTS PPTAIFASND EMAAGVLYAA RLRGIEVPEQ LSIIGFDDTP LTTRVWPPLT
TVRWPIAAMG RAAALKLIGT AIGEEAEVSE PSLFSSTLIR RSSVAPLAS
//
