ID J2QZ35_9PSED Unreviewed; 367 AA.
AC J2QZ35;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJM41769.1};
GN ORFNames=PMI26_03470 {ECO:0000313|EMBL:EJM41769.1};
OS Pseudomonas sp. GM33.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1144329 {ECO:0000313|EMBL:EJM41769.1, ECO:0000313|Proteomes:UP000007274};
RN [1] {ECO:0000313|EMBL:EJM41769.1, ECO:0000313|Proteomes:UP000007274}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GM33 {ECO:0000313|EMBL:EJM41769.1,
RC ECO:0000313|Proteomes:UP000007274};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJM41769.1}.
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DR EMBL; AKJO01000091; EJM41769.1; -; Genomic_DNA.
DR RefSeq; WP_007975492.1; NZ_AKJO01000091.1.
DR AlphaFoldDB; J2QZ35; -.
DR GeneID; 72197670; -.
DR PATRIC; fig|1144329.3.peg.3436; -.
DR Proteomes; UP000007274; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0009893; P:positive regulation of metabolic process; IEA:UniProt.
DR CDD; cd03136; GATase1_AraC_ArgR_like; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002818; DJ-1/PfpI.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR PANTHER; PTHR43130; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43130:SF3; THIJ_PFPI FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14240); 1.
DR Pfam; PF01965; DJ-1_PfpI; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:EJM41769.1}.
FT DOMAIN 227..325
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 367 AA; 41009 MW; 8A8F47D0D1CC9DFA CRC64;
MTTFNSGAQP QNRAPQSIGF LLLDNFTLIS LASAVEPLRM ANQLSGRELY RWTTLTVDGG
QVWASDGLQI TPDASMHKAP PMDTVIVCGG IGIQRTVTRE HVSWLQSQAR QSRRLGAVCT
GSWALACAGL LDGFDCSVHW ECLAAMQEAF PRVAMSTRLF TLDRNRFTSS GGTAPLDMML
HLISRDHGRE LSAAISEMFV YERIRNEQDH QRVPLKHMLG TNQPKLQEIV ALMEANLEEP
IDLDELAVYV AVSRRQLERL FQKYLHCSPS RYYLKLRLIR ARQLLKQTPM SIIEVASVCG
FVSTPHFSKC YREYFGIPPR DERVGSNTTQ QVAMMPLPQA LVLSPLSGPL SALSQARNES
TFASVRL
//
