ID J2T0D6_9FLAO Unreviewed; 314 AA.
AC J2T0D6;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Putative low-complexity protein {ECO:0000313|EMBL:EJL71422.1};
GN ORFNames=PMI13_02370 {ECO:0000313|EMBL:EJL71422.1};
OS Chryseobacterium populi.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae;
OC Chryseobacterium group; Chryseobacterium.
OX NCBI_TaxID=1144316 {ECO:0000313|EMBL:EJL71422.1, ECO:0000313|Proteomes:UP000007509};
RN [1] {ECO:0000313|EMBL:EJL71422.1, ECO:0000313|Proteomes:UP000007509}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF314 {ECO:0000313|EMBL:EJL71422.1,
RC ECO:0000313|Proteomes:UP000007509};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL71422.1}.
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DR EMBL; AKJY01000041; EJL71422.1; -; Genomic_DNA.
DR RefSeq; WP_007843832.1; NZ_AKJY01000041.1.
DR AlphaFoldDB; J2T0D6; -.
DR PATRIC; fig|1144316.3.peg.2389; -.
DR OrthoDB; 9812495at2; -.
DR Proteomes; UP000007509; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001646; 5peptide_repeat.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR14136:SF17; BTB_POZ DOMAIN-CONTAINING PROTEIN KCTD9; 1.
DR PANTHER; PTHR14136; UNCHARACTERIZED; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF13599; Pentapeptide_4; 2.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 314 AA; 34754 MW; CBFBA0E55AE475AA CRC64;
MDTKILGGKI VNARKVNNMS QAQLAGLLFI SPQAVGKWER GESIPDFITI NRLSEIFNVD
LNYFSENLQS LADEQLLETI NNQTGETRRG ASEETEFSVS QNHELLTNFS GSALAETDLA
GVKAPKRKFF GSDLQRANFA GADLTGSSFK GSNMQKTDFK ETNLTDCSLS ANNLTDTIFN
KTILVRTEFH ASELTNAEFT DVKLIDVKFT ATDLKETIFK NCEFKGVHFK SADMSGMCLD
GQVFIDVKFD NAALNEASFK GATFRNVSFR PTFALTNRYY KTLKTICFEG AMMDKLTYAA
LKGLGVDLSK AMTI
//
