ID   J2VNT9_9BURK            Unreviewed;       307 AA.
AC   J2VNT9;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 50.
DE   SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EJN01740.1};
GN   ORFNames=PMI40_03227 {ECO:0000313|EMBL:EJN01740.1};
OS   Herbaspirillum sp. YR522.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Oxalobacteraceae; Herbaspirillum.
OX   NCBI_TaxID=1144342 {ECO:0000313|EMBL:EJN01740.1, ECO:0000313|Proteomes:UP000007507};
RN   [1] {ECO:0000313|EMBL:EJN01740.1, ECO:0000313|Proteomes:UP000007507}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=YR522 {ECO:0000313|EMBL:EJN01740.1,
RC   ECO:0000313|Proteomes:UP000007507};
RX   PubMed=23045501; DOI=10.1128/JB.01243-12;
RA   Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA   Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT   "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT   sequences from diverse bacteria isolated from the rhizosphere and
RT   endosphere of Populus deltoides.";
RL   J. Bacteriol. 194:5991-5993(2012).
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJN01740.1}.
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DR   EMBL; AKJA01000109; EJN01740.1; -; Genomic_DNA.
DR   RefSeq; WP_008116871.1; NZ_AKJA01000109.1.
DR   AlphaFoldDB; J2VNT9; -.
DR   STRING; 1144342.PMI40_03227; -.
DR   eggNOG; COG0583; Bacteria.
DR   OrthoDB; 8928056at2; -.
DR   Proteomes; UP000007507; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd08422; PBP2_CrgA_like; 1.
DR   Gene3D; 3.40.190.290; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30537:SF5; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR TTDR-RELATED; 1.
DR   PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007507};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        230..249
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          8..64
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   307 AA;  33971 MW;  1F50575EF9AB6842 CRC64;
     MNPFDSKNSD QIAALLALNE GTSFVAAGKL LQRHPTVISK RVAELESRLG VRLVERTTRQ
     VRFTEAGLQY IQRLDSVRTA LLDADAEVAA NSHQAQGTLR LALPTAMGRI WLAPLLAEFV
     REHPNLSLHA EYSEKFVDII TEGFDAAIRI GELPDSRLRA TRLCENHRIL CASPSYLKQR
     GVPQSPSQLT FHNCLGFTGL TSFPAWKLYR GTTCESVPVR GNMTSNDNEA LLAAAIAGVG
     ILACGYWLVS REIRSGGLQQ VLPDWELDAK SGVYFVRPSV SHAAAKVKTF KQWIEKRLQP
     APPWLIE
//