ID J2XBE5_9PSED Unreviewed; 339 AA.
AC J2XBE5;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EJN28432.1};
GN ORFNames=PMI37_03623 {ECO:0000313|EMBL:EJN28432.1};
OS Pseudomonas sp. GM80.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1144339 {ECO:0000313|EMBL:EJN28432.1, ECO:0000313|Proteomes:UP000007301};
RN [1] {ECO:0000313|EMBL:EJN28432.1, ECO:0000313|Proteomes:UP000007301}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GM80 {ECO:0000313|EMBL:EJN28432.1,
RC ECO:0000313|Proteomes:UP000007301};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJN28432.1}.
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DR EMBL; AKJD01000108; EJN28432.1; -; Genomic_DNA.
DR RefSeq; WP_008083265.1; NZ_AKJD01000108.1.
DR AlphaFoldDB; J2XBE5; -.
DR PATRIC; fig|1144339.3.peg.3463; -.
DR OrthoDB; 9798934at2; -.
DR Proteomes; UP000007301; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR001761; Peripla_BP/Lac1_sug-bd_dom.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF152; HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATED; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF00532; Peripla_BP_1; 1.
DR PRINTS; PR00036; HTHLACI.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..56
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
FT DOMAIN 3..46
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 339 AA; 36393 MW; 68A9529008B4C8EE CRC64;
MATIKDVAAL AGISYTTVSH VVNNTRPVSQ QVRLKVEAAI KSLDYVPSAV ARSLKAKTTA
TIGLLVPNSL NPYFAELARG IEDYCERNGY CVILCNSDDN PEKQRSYLRV LLEKRIDGLI
VASAGGDSGL AQGLAGVKTP MVIVDRGLDG VDADLVRIDH EYGAYLATRH LLELGHRDIA
TIGGPASTSV AQMRQAGYCR ALKEAGIEVR QARMLESDFT STGGYNAAAI LLENNPPSAI
FAGNDMIGIG VLRAAAERNV RVPSELSVIG FDDIQMSRYV YPALTTVGQS ILQLGEMAAE
VLLRRIATPN LGTDQRIVTP SIVLRESTAP LSGVFTEYR
//
