ID J3CZN3_9BURK Unreviewed; 678 AA.
AC J3CZN3;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL81764.1};
GN ORFNames=PMI16_04619 {ECO:0000313|EMBL:EJL81764.1};
OS Herbaspirillum sp. CF444.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Herbaspirillum.
OX NCBI_TaxID=1144319 {ECO:0000313|EMBL:EJL81764.1, ECO:0000313|Proteomes:UP000007296};
RN [1] {ECO:0000313|EMBL:EJL81764.1, ECO:0000313|Proteomes:UP000007296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF444 {ECO:0000313|EMBL:EJL81764.1,
RC ECO:0000313|Proteomes:UP000007296};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL81764.1}.
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DR EMBL; AKJW01000110; EJL81764.1; -; Genomic_DNA.
DR RefSeq; WP_007883987.1; NZ_AKJW01000110.1.
DR AlphaFoldDB; J3CZN3; -.
DR STRING; 1144319.PMI16_04619; -.
DR PATRIC; fig|1144319.3.peg.4668; -.
DR eggNOG; COG5001; Bacteria.
DR OrthoDB; 9813903at2; -.
DR Proteomes; UP000007296; Unassembled WGS sequence.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
FT DOMAIN 119..176
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 190..242
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 274..407
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 419..672
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 678 AA; 75473 MW; FEB53A3F5A27D1C2 CRC64;
MIAMLSSNDL ACCSALLDAV LGLEGLALHD ALSEIVSVFL GRAGGRYFSE APLENAQLAQ
IVAHDGLLYG HYAFPAADMA FGDTEIARLA SFAALTGRLL QNRADTEKRS RVLDQIESKL
EQQAQILNQM HESVITMDQA GFITSWNRGA EQLFGYTAIE AIGRNVLFLY ENEDEDDTSL
NDMFLSQGGR EMEVRRRKKS GEAFWASLSL SVMRDQHGQP IGMIGYINDI TERKNAEKLI
HHLAYYDSLT GLPNRTLLTR TVDQALVAAQ QDNVYGCIMF IDLNRFKPIN DTLGHVAGDM
LLVEVAIRLR KALRDEDVVA RLGADEFAIA LFDIDKDYHA GFVAQKLIAL FDEPFFIDGH
ELRVGASIGI SMYPQDASDT ETLLRLADIA MYRAKQGGEN NEGGYAYYSE EMNRNTLDLL
RIETGLLHAF EYDELLLYYQ PKINLVGGQI TGAEALVRWQ HPERGLLLPG DFIPIAEETG
LIVQLSDWVL EAACAQARQW KDAGMEPIRI AINVTAREFT RSLPDRVRAA LSRHQLTGEW
LELEITESML MHSTDRVISI MEKVCLLGVA ISLDDFGTGY SSLSYLKRFP INTLKIDRSF
TTGIPEDTND CAIASAIISI AKQLRHKVIA EGVESMAQFD FLREAGCDEL QGYLFSRPVP
AADFHLMLTE GRKFSAAV
//
