ID   J3D8J7_9BURK            Unreviewed;       762 AA.
AC   J3D8J7;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   SubName: Full=Arginine/lysine/ornithine decarboxylase {ECO:0000313|EMBL:EJL86811.1};
GN   ORFNames=PMI15_01314 {ECO:0000313|EMBL:EJL86811.1};
OS   Polaromonas sp. CF318.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Polaromonas.
OX   NCBI_TaxID=1144318 {ECO:0000313|EMBL:EJL86811.1, ECO:0000313|Proteomes:UP000007275};
RN   [1] {ECO:0000313|EMBL:EJL86811.1, ECO:0000313|Proteomes:UP000007275}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CF318 {ECO:0000313|EMBL:EJL86811.1,
RC   ECO:0000313|Proteomes:UP000007275};
RX   PubMed=23045501; DOI=10.1128/JB.01243-12;
RA   Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA   Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT   "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT   sequences from diverse bacteria isolated from the rhizosphere and
RT   endosphere of Populus deltoides.";
RL   J. Bacteriol. 194:5991-5993(2012).
CC   -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-I family.
CC       {ECO:0000256|ARBA:ARBA00010671}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJL86811.1}.
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DR   EMBL; AKIV01000043; EJL86811.1; -; Genomic_DNA.
DR   RefSeq; WP_007865348.1; NZ_AKIV01000043.1.
DR   AlphaFoldDB; J3D8J7; -.
DR   PATRIC; fig|1144318.3.peg.1261; -.
DR   OrthoDB; 9761189at2; -.
DR   Proteomes; UP000007275; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR   GO; GO:0016831; F:carboxy-lyase activity; IEA:InterPro.
DR   GO; GO:0006520; P:amino acid metabolic process; IEA:InterPro.
DR   Gene3D; 3.40.50.2300; -; 1.
DR   Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR   Gene3D; 3.90.100.10; Orn/Lys/Arg decarboxylase, C-terminal domain; 1.
DR   Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR   InterPro; IPR005308; OKR_de-COase_N.
DR   InterPro; IPR011193; Orn/lys/arg_de-COase.
DR   InterPro; IPR000310; Orn/Lys/Arg_deCO2ase_major_dom.
DR   InterPro; IPR008286; Prn/Lys/Arg_de-COase_C.
DR   InterPro; IPR036633; Prn/Lys/Arg_de-COase_C_sf.
DR   InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR   InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR   InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR   PANTHER; PTHR45229:SF3; BIODEGRADATIVE ARGININE DECARBOXYLASE; 1.
DR   PANTHER; PTHR45229; CONSTITUTIVE ORNITHINE DECARBOXYLASE; 1.
DR   Pfam; PF01276; OKR_DC_1; 1.
DR   Pfam; PF03711; OKR_DC_1_C; 1.
DR   Pfam; PF03709; OKR_DC_1_N; 1.
DR   PIRSF; PIRSF009393; Orn_decarb; 1.
DR   SUPFAM; SSF55904; Ornithine decarboxylase C-terminal domain; 1.
DR   SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR   PROSITE; PS00703; OKR_DC_1; 1.
PE   3: Inferred from homology;
KW   Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898,
KW   ECO:0000256|PIRSR:PIRSR009393-1}.
FT   DOMAIN          392..406
FT                   /note="Orn/Lys/Arg decarboxylases family 1 pyridoxal-P
FT                   attachment site"
FT                   /evidence="ECO:0000259|PROSITE:PS00703"
FT   MOD_RES         397
FT                   /note="N6-(pyridoxal phosphate)lysine"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR009393-1"
SQ   SEQUENCE   762 AA;  85526 MW;  D0A40BD87F6BAFAE CRC64;
     MKFRFPIVII DEDFRSENTS GLGIRALAQA IESEGFEVLG VTSYGDLSQF AQQQSRASAF
     ILSIDDEEFS PGPDLDPAVL NLRTFIEEVR RKNLDVPIYV YGETKTSRHI PNDILRELHG
     FIHMFEDTPE FVARHILREA KSYLEGVQPP FFKALLDYAE DGSYSWHCPG HSGGVAFLKS
     PVGQMFHQFF GENMLRADVC NAVEELGQLL DHDGAIGASE RNAARIFNAD HCFFVTNGTS
     TSNKMVWHHT VAPGDVVVVD RNCHKSILHS IIMTGAIPVF LKPTRNHFGI IGPIPQSEFE
     PDAIRAKIDA NPLLKGVDSS KVRPRVLTLT QSTYDGVLYN TETIKGMLDG YIDNLHFDEA
     WLPHAAFHPF YGAYHAMGKN RVRPKNAVVY ATQSIHKLLA GISQASHVLV QDSQDVKLDR
     HLFNEAYLMH TSTSPQYSII ASCDVAAAMM EPPGGTALVE ESIAESLDFR RAMRKIDEEY
     GDDWWFKVWG PDKLVEEGIG EAQDWIIKGE SRSAKMAKNG ANNWHGFGQM ATGFNMLDPI
     KSTIVTPGLD LNGKFAKTGI PASIVTKFLA EHGVIVEKTG LYSFFIMFTI GITKGRWNTL
     LTALQQFKDD YDKNQPMWRI LPEFCQKYPK YERMGLADLC QHIHTLYAKY DIARLTTEVY
     LSDLAPAMKP SDAYAHIAHR TTERVEIDQL EGRITVGLVT PYPPGIPLLI PGEVFNKRIV
     DYLKFSREFN AQCPGFETDI HGLVEEVDAK GKTRYYADCV KK
//