ID J3DIP3_9BURK Unreviewed; 308 AA.
AC J3DIP3;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EJL92769.1};
GN ORFNames=PMI16_00921 {ECO:0000313|EMBL:EJL92769.1};
OS Herbaspirillum sp. CF444.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Herbaspirillum.
OX NCBI_TaxID=1144319 {ECO:0000313|EMBL:EJL92769.1, ECO:0000313|Proteomes:UP000007296};
RN [1] {ECO:0000313|EMBL:EJL92769.1, ECO:0000313|Proteomes:UP000007296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF444 {ECO:0000313|EMBL:EJL92769.1,
RC ECO:0000313|Proteomes:UP000007296};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL92769.1}.
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DR EMBL; AKJW01000018; EJL92769.1; -; Genomic_DNA.
DR RefSeq; WP_007876812.1; NZ_AKJW01000018.1.
DR AlphaFoldDB; J3DIP3; -.
DR STRING; 1144319.PMI16_00921; -.
DR PATRIC; fig|1144319.3.peg.926; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 5293066at2; -.
DR Proteomes; UP000007296; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF4; LYSR FAMILY TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 3..60
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 308 AA; 33786 MW; 9E280B3F15B59D7D CRC64;
MNLTLEALQI LDMIDRKGSF AAAALALDRV PSALTYSVRK LEDDLDVLLF DRRGHRAKLT
AAGLELLTEG RHLLHAADDL EQRVRRTATG RETELRIVLN SIIPFAKMLP LIAAFDREAG
GTRLRFVPGV LSGTWEELMA GRADLVIGAT LDGPEIVRTS GRFQTRPLGM VDWAFAVAPS
HPLADAPEPL PPELVRQHRA IAVGDSSRSH PGITMGLLAG QETLTVPSVD DKLRAQLAGL
GCGHLPRFWA QHYLDNGALL EKQTIMSKPH ENFLIAWPKA NQGKSLKWFL HQLSQPEIQQ
ALLGPVTP
//
