ID J3K8Z1_COCIM Unreviewed; 615 AA.
AC J3K8Z1;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 2.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=RNA binding protein {ECO:0000313|EMBL:EAS31326.3};
GN ORFNames=CIMG_06805 {ECO:0000313|EMBL:EAS31326.3};
OS Coccidioides immitis (strain RS) (Valley fever fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=246410 {ECO:0000313|EMBL:EAS31326.3, ECO:0000313|Proteomes:UP000001261};
RN [1] {ECO:0000313|Proteomes:UP000001261}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS {ECO:0000313|Proteomes:UP000001261};
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
RN [2] {ECO:0000313|Proteomes:UP000001261}
RP GENOME REANNOTATION.
RC STRAIN=RS {ECO:0000313|Proteomes:UP000001261};
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
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DR EMBL; GG704912; EAS31326.3; -; Genomic_DNA.
DR RefSeq; XP_001242909.1; XM_001242908.2.
DR AlphaFoldDB; J3K8Z1; -.
DR STRING; 246410.J3K8Z1; -.
DR GeneID; 4561475; -.
DR KEGG; cim:CIMG_06805; -.
DR VEuPathDB; FungiDB:CIMG_06805; -.
DR InParanoid; J3K8Z1; -.
DR OMA; MIFRQKP; -.
DR OrthoDB; 316997at2759; -.
DR Proteomes; UP000001261; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12245; RRM_scw1_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR10501:SF78; PROTEIN WHI3-RELATED; 1.
DR PANTHER; PTHR10501; U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001261};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 403..480
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 81..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 350..370
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 615 AA; 65331 MW; 13A7B5F9F63A5453 CRC64;
MSNSTGQSRQ TAPLYENGLQ RNSSNVSTPA APHLSISTSN PLPSAMNRMP SDVFSPVASQ
PSALPSTFSY ALTPIGKTPA FEPQNPGLSL AADSERPLSG MNNENVAPGS INLPAGHAAM
LIRRLPRNTS HEALRTMLLF TKNFINTTFV PNTYPDDGDL LTAVAFFETR SAAEEAREML
NGKRNSTNEA NMIVEVILDA PSATAMLQRR NTIDQVPRSS VINSLSQVTP PGLASQPNLL
SRFDQGVASN GTVGHNDFQS PDQASRLQSL FSSQSPLGDG LNGRPRITGK SVIDQEVDED
TGELLKDPIA YARNGHSGSM AMPRRSTNPP MPLSNFGNLS LSTNLTSPSL QSFGSGTSTR
PTPSSAMSPN FPNIGPNNGY HQTTYHRLNY PPVNPADQNP PCNTLYVGNL PPDTSEDELK
ALFSRQRGYK RMIFRQKPNG PICFVEFDDI SWATKSLKEL YGYELSNSIK GGIRLSFSKN
PLGVRNSQAG NMHSTNPMTS HASINAINGP GLIGTPRFST ASGPPPGLSA PPGLPIPMGM
ATNGLPSPHP GLNNGTSSNT FVPNPGLGIG INPIGNGMGR LRQASLNDTI IGNPTAGPAL
SAMNGAGYPD YMMGR
//
