ID J3L361_ORYBR Unreviewed; 382 AA.
AC J3L361;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE RecName: Full=Tryptophan synthase beta chain-like PALP domain-containing protein {ECO:0000259|Pfam:PF00291};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB01G36670.1};
RN [1] {ECO:0000313|EnsemblPlants:OB01G36670.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB01G36670.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB01G36670.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- SIMILARITY: Belongs to the ACC deaminase/D-cysteine desulfhydrase
CC family. {ECO:0000256|ARBA:ARBA00008639}.
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DR AlphaFoldDB; J3L361; -.
DR STRING; 4533.J3L361; -.
DR EnsemblPlants; OB01G36670.1; OB01G36670.1; OB01G36670.
DR Gramene; OB01G36670.1; OB01G36670.1; OB01G36670.
DR eggNOG; ENOG502QPSP; Eukaryota.
DR HOGENOM; CLU_037807_1_0_1; -.
DR OMA; WEVYAVM; -.
DR Proteomes; UP000006038; Chromosome 1.
DR Gene3D; 3.40.50.1100; -; 2.
DR InterPro; IPR027278; ACCD_DCysDesulf.
DR InterPro; IPR001926; TrpB-like_PALP.
DR InterPro; IPR036052; TrpB-like_PALP_sf.
DR PANTHER; PTHR43780; 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED; 1.
DR PANTHER; PTHR43780:SF7; D-CYSTEINE DESULFHYDRASE 2, MITOCHONDRIAL; 1.
DR Pfam; PF00291; PALP; 1.
DR PIRSF; PIRSF006278; ACCD_DCysDesulf; 2.
DR SUPFAM; SSF53686; Tryptophan synthase beta subunit-like PLP-dependent enzymes; 1.
PE 3: Inferred from homology;
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898,
KW ECO:0000256|PIRSR:PIRSR006278-2};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT DOMAIN 53..360
FT /note="Tryptophan synthase beta chain-like PALP"
FT /evidence="ECO:0000259|Pfam:PF00291"
FT REGION 1..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..29
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 94
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PIRSR:PIRSR006278-1"
FT MOD_RES 67
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR006278-2"
SQ SEQUENCE 382 AA; 41785 MW; 9039712DE4D8A38C CRC64;
MLPSPATQVH TISVRPSHSL PSPPHHLAFS NLTTAPKRHG GKGEEEGSPR FEVVRDDLLH
PLANGNKARK LDALLPLLRR RGATDVVTCG GCQSAHAAAT AVHCAEWGMR PHILLRGEQP
DVPTGYNLIS LMFGNVTYVS RSVYAHRDEM LYDHARKVAG TGGTVLWADD IGREDFVLDE
DNCEIGSRRV VIIKEGAGNV QALLGVIRLV EYLYNLSSFQ KHENVHVVVD AGTGTTAVGL
ALGAVCLGLP WRVTAVMLAD TLERYKEREK ALISDFKKLC HNCHEMVGEN DIGDNLVEWV
ERFSPRRFGK VLNGEIALCR QIAQQTGVLL DPMYTLAGWE QAVDLCVGDS KTKVVMIHTG
GTLGLCGLAQ RYSQHFSADE QA
//
