ID J3L720_ORYBR Unreviewed; 703 AA.
AC J3L720;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=RRM domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=102721216 {ECO:0000313|EnsemblPlants:OB01G50260.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB01G50260.1};
RN [1] {ECO:0000313|EnsemblPlants:OB01G50260.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB01G50260.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB01G50260.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR RefSeq; XP_006645211.1; XM_006645148.2.
DR AlphaFoldDB; J3L720; -.
DR STRING; 4533.J3L720; -.
DR EnsemblPlants; OB01G50260.1; OB01G50260.1; OB01G50260.
DR Gramene; OB01G50260.1; OB01G50260.1; OB01G50260.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_10_1; -.
DR OMA; DEMISRN; -.
DR OrthoDB; 624416at2759; -.
DR Proteomes; UP000006038; Chromosome 1.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 111..145
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 181..215
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 314..348
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 415..449
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 517..551
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 552..587
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..48
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 703 AA; 76279 MW; E1CED01B593B6330 CRC64;
MAARALLSGL RLAPLSRQRP GRSLSAAAAP PLDEDESPHP PPPTPPSNSK LFVAGLSWAA
DERSLTDAFS SFGAVTEDGV HGRCSMKQLK CSGRSGRPQP RQTLDETPVR DVVACSAAIY
RHAKSGLFGD AVKLFVGMMR AGVSPNSFTL VSALLAAAGM GDMVLSECIH GWAMKSRLES
NPFVRTALLD SYAKCGCPMK SWALFGEMRD PGIVTWNALI SGLVQNDLFE EALLVFKRLL
FSFGPVHNVV TMISIAQAYA GCGDLGSCES AHAYSIKIGL DSNVSATNSI LGMYLSFGSL
AIGRDIFQKI TVSDVVSWTM MMGFLLGEAQ AIEVIRLFVQ MRSSGIVPDR VAMVTVAQAC
ANLGDGRIGK LVHNQIVIRG FSGELPAVNS LITMYAKCED LSSARMLFDG TMEKSLVSWT
AMVSAYVENG YALEGMHLFA KMRHEDCFMI DSVTLVTLLL ACYEIAYFEL CIQLHVYCYK
SGLCLYKPVL NTLIAVYGKC GYATLARKMF DEMISRNIVS WNTMILSYGI NGQGEKAVAL
FNEMDKSNED RDSVTYLNTL LACSHSGLVD DGMLIFRRMI DEKGINPCPE HVGCIVDMLA
RAGRLDEAAE VASLTQNKIG SDAWKALMGG GHLHGDMELT KVAAEKVLAL ESFDYGHVVL
LSNAYASSGK YTAAESVRSC YTKRNKKKTL GLSSIGIMPY SRR
//
