ID J3LMF2_ORYBR Unreviewed; 378 AA.
AC J3LMF2;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB03G22280.1};
RN [1] {ECO:0000313|EnsemblPlants:OB03G22280.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB03G22280.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB03G22280.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR AlphaFoldDB; J3LMF2; -.
DR STRING; 4533.J3LMF2; -.
DR EnsemblPlants; OB03G22280.1; OB03G22280.1; OB03G22280.
DR Gramene; OB03G22280.1; OB03G22280.1; OB03G22280.
DR eggNOG; KOG0800; Eukaryota.
DR HOGENOM; CLU_071713_0_0_1; -.
DR OMA; CKFRAHS; -.
DR Proteomes; UP000006038; Chromosome 3.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:EnsemblPlants.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:EnsemblPlants.
DR GO; GO:0009789; P:positive regulation of abscisic acid-activated signaling pathway; IEA:EnsemblPlants.
DR GO; GO:0016567; P:protein ubiquitination; IEA:EnsemblPlants.
DR GO; GO:0009737; P:response to abscisic acid; IEA:EnsemblPlants.
DR GO; GO:0009651; P:response to salt stress; IEA:EnsemblPlants.
DR GO; GO:0009414; P:response to water deprivation; IEA:EnsemblPlants.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:EnsemblPlants.
DR CDD; cd16454; RING-H2_PA-TM-RING; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45977:SF4; RING-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR45977; TARGET OF ERK KINASE MPK-1; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 6..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 116..136
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 142..161
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 320..361
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 378 AA; 41898 MW; EE05A6909F10D932 CRC64;
MEPWGFLVRV LVGPSLSSFF VGGFQGFGAS GAWARQVFVP ARSGKGFRAI HKGLWWWWRR
CWPEGAMSFV FRGSRADIEA GGFPGFAPER RAMVSVSGRF YTRFCLNRIH AGGRPVNSNL
AFLVTVLMLF MVLNSHQMSP NFLLWLVLGV FLMATSLRMY ATCQQLQAQA QAHAAAANGF
LGTELRVHVP PTIALATRGR LQSLRLQLAL LDREFDDLDY DALRALDADN SPHAPSMSEE
EINALPVFKY KVQAQGNASS RKSGPSQPSI SSTEASNELA LLEIIERYLV NLGLVNIVVK
KQDLFKADGT DNTLEDELTC TVCLEQVIVG DLLRSLPCLH QFHANCIDPW LRQQGTCPVC
KHRVSDGWHS EADASNMV
//
