ID J3MKC8_ORYBR Unreviewed; 321 AA.
AC J3MKC8;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=102717263 {ECO:0000313|EnsemblPlants:OB07G18600.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB07G18600.1};
RN [1] {ECO:0000313|EnsemblPlants:OB07G18600.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB07G18600.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB07G18600.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR RefSeq; XP_015695397.1; XM_015839911.1.
DR RefSeq; XP_015695398.1; XM_015839912.1.
DR RefSeq; XP_015695399.1; XM_015839913.1.
DR RefSeq; XP_015695400.1; XM_015839914.1.
DR AlphaFoldDB; J3MKC8; -.
DR EnsemblPlants; OB07G18600.1; OB07G18600.1; OB07G18600.
DR GeneID; 102717263; -.
DR Gramene; OB07G18600.1; OB07G18600.1; OB07G18600.
DR KEGG; obr:102717263; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_0_1; -.
DR OMA; HSFYVAD; -.
DR OrthoDB; 550928at2759; -.
DR Proteomes; UP000006038; Chromosome 7.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR24015:SF898; OS07G0436600 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 37..71
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 140..174
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 321 AA; 35174 MW; 4F65455C0643F6D5 CRC64;
MCGVGDFHVG SGLVSMYFRV GLPWLARRVF DGMDYRNVVS WTAMVGGYTE SGMFEDAVDV
FRAMWVIGGV LPNRIALISV LPAIEFLANL PAGKQVHCFA VRMELSGEVS LNNALVDMYG
KCGALWYARR IFNDGNWCKD VISWCSMIQG YGLHGDGEEA VALFDQMRTS GVMPDSMIGL
GVLSACSRAG LVFKGLEIYH SLVKDCGVHP TEEMSACIVD LLGRSGLIKH ALVFIKSMTV
EPGPSVWGAL LDASVIHNNK EVQDLACRYL LRLEEGNPSN LVSVSNLHAF EGSWNIVEEV
RAKIKQEALK KTPGFSWISP T
//
