ID J3N008_ORYBR Unreviewed; 1785 AA.
AC J3N008;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Histone-lysine N-methyltransferase {ECO:0000313|EnsemblPlants:OB09G25870.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB09G25870.1};
RN [1] {ECO:0000313|EnsemblPlants:OB09G25870.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB09G25870.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB09G25870.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR STRING; 4533.J3N008; -.
DR EnsemblPlants; OB09G25870.1; OB09G25870.1; OB09G25870.
DR Gramene; OB09G25870.1; OB09G25870.1; OB09G25870.
DR eggNOG; KOG0954; Eukaryota.
DR eggNOG; KOG4443; Eukaryota.
DR HOGENOM; CLU_238882_0_0_1; -.
DR OMA; NTCHCAD; -.
DR Proteomes; UP000006038; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR CDD; cd15571; ePHD; 1.
DR CDD; cd15492; PHD_BRPF_JADE_like; 1.
DR CDD; cd10518; SET_SETD1-like; 1.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR003616; Post-SET_dom.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR032308; TDBD.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45838:SF4; HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX; 1.
DR PANTHER; PTHR45838; HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER; 1.
DR Pfam; PF13831; PHD_2; 1.
DR Pfam; PF00856; SET; 1.
DR Pfam; PF16135; TDBD; 1.
DR Pfam; PF13832; zf-HC5HC2H_2; 1.
DR SMART; SM00249; PHD; 2.
DR SMART; SM00317; SET; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS51805; EPHD; 1.
DR PROSITE; PS50868; POST_SET; 1.
DR PROSITE; PS50280; SET; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 1297..1347
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 1441..1555
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT DOMAIN 1640..1761
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT DOMAIN 1769..1785
FT /note="Post-SET"
FT /evidence="ECO:0000259|PROSITE:PS50868"
FT REGION 224..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 953..976
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1007..1030
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1057..1082
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1171..1195
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 224..239
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 958..976
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1057..1079
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1178..1195
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1785 AA; 198503 MW; AB7D0006F8559EF3 CRC64;
MAGEACGGEF FVGGAGIFGV CCFCHRLRMS VAKFCEHSGG PAEKAGEIVV MDNGMTIGQW
LKYCMGVGSS ISDAKWDWPE WAHMRYSPEE LWTKNLLIAN SNMEKTGLFS GHGNNTGPID
NPVYSSDMHN EVGGLTSVEK LVNKPDETYY RKSVGLHEAF TKKPALQQSS KLNLANHTIH
DMNLNSIRTP KVRTCSTANM GITYSRNHLA HDYANLLEKN LNNLSRSSGP SSTRVSRNDN
RACMPDIPRK IFQDGSGRAS NTELKLGQSS YHQSMTTLFP SVQSTIIEFQ KPQEHLQFTT
PNLEDRDVVQ NDKNYQTGGS KKLLMVTILK ICQELVMLGA EYIKRKKTPQ QAASAITMNR
KTRAFPCNVH IMSESLGADA YPKQTTNANK TIESIDPSFS TGNRKRPLEV ANGTSHSELN
EVTVDTAKNS FISLFLSHLE RNSTSESIDD VLNSNEHYLL KAPDVAYSSD HLKAASTQVE
TRANDNQLKL TPAIIHTKRI SNGRSLPVAS KGYVHQDVLH GNSQEPSLNG DCLPQLLPSQ
PNAGISKICT EVSSPVNCRC CNHVADKSHL AHAETRAPCL YDRTARRYMS FDCADDLCTH
KSLRATKISC QCGKAFCYTP SEFLPSFGQN DQSSLGKPIH RCCCKAQEDS SNLGFRAGNF
CRSHFCNDGA PVPDHRSIVE GLDGARTCST FIPRSSLCSR ELMLQSCCQA CPIDGFHYRS
SMGHTANSLT KNPLVEAPNT TEHSPCQDGK CSCSLVPKCL VGYGFRKQCV ARIDQTDHIV
QKSKDGDVQA AARCCTLGES EKLICQCSSE IIARRNDSFQ NEISNKVLNR PYVPISEQLK
NVTEASAVGD HWPYETAREK ESARRDSGIF KELKSGFSSG FSSDVVTKFS ASPDGNNISS
CTAKYGFEHK NYVFDEGSRI EKCSSSSYVP ISTGCEEAQN SFSRFHLKPS LVKNKNNKIS
EGSKRKEHEN EGQCSETPKK TRTLECCAKQ SESDDYIMKI NLSSLEGDSQ PRHEAVPFSR
RVSKTKRKHP PMRLNKHVKW LHKNYKVLDV DDERSDNKGI LVGESNSSDR EKQEDDVTTS
ARTKCQQQGS RLFARKLPKY VSLNGIVNEP NSEDACSGSA SIDSSLIATG ITNDNRKSPK
IVPLSLILKK AKRCRTVKSL GKTEHAHFSE EKSSDCSVDK SSSSNRSFSS QDELWSPKNN
RYSCNASRPH VKSDHQNPCH VLEEDELLSL ADIGTSQLSA SRSRGIKTRR ACISLNRMER
CEEFTNESAC SSCGDKHSAV QVCEAKFERY AQRPSLDASC CVCGISNLEP CNQLIECSKC
FIKVHQACYG VLKVPRGQWF CRPCKINIHD TVCVICGYGG GAMTRALKAK NILKSLLWGI
ATTRRSDKYA YSSGNGNSEC TSSFHGEYVR HDSFHGPRSR SFNTISSIDM EEASIGSALG
NITSQSWTSN PNSSLFGPRT RQWVHVVCGL WTPGTECPNA ITMSAFDISG ASPAKRNTEC
SICNRTGGSF MGCRDVHCSV LFHPWCAHQK GLLQSEPEGE HNENVGFYGR CLDHAMLGSN
HVKLKECLKI NDWTCARTEG FGGRKGDWFD ANRSKKPEEK FGECSVSQEQ INAWVRINGS
KSCMRGQKEY VHYKQLKGWK HLVVYKSGIH GLGLYTSEFI PRGSMVVEYV GEIVGQYVAD
KREIEYQSGK RQQYKSACYF FKIDKEHIID ATRKGGIARF INHSCQPNCV AKIISVRNEK
KVVFFAERHI NPGEEITYDY HFNREDEGHR IPCFCRSLGC RRYLN
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