ID J3N1B5_ORYBR Unreviewed; 1605 AA.
AC J3N1B5;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=Protein kinase domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB10G13130.1};
RN [1] {ECO:0000313|EnsemblPlants:OB10G13130.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB10G13130.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB10G13130.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR EnsemblPlants; OB10G13130.1; OB10G13130.1; OB10G13130.
DR Gramene; OB10G13130.1; OB10G13130.1; OB10G13130.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_244127_0_0_1; -.
DR Proteomes; UP000006038; Chromosome 10.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0030247; F:polysaccharide binding; IEA:InterPro.
DR GO; GO:0004672; F:protein kinase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0007166; P:cell surface receptor signaling pathway; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0016310; P:phosphorylation; IEA:UniProtKB-KW.
DR CDD; cd00054; EGF_CA; 1.
DR Gene3D; 2.10.25.10; Laminin; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.510.10; Transferase(Phosphotransferase) domain 1; 1.
DR InterPro; IPR001881; EGF-like_Ca-bd_dom.
DR InterPro; IPR000742; EGF-like_dom.
DR InterPro; IPR018097; EGF_Ca-bd_CS.
DR InterPro; IPR025724; GAG-pre-integrase_dom.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR011009; Kinase-like_dom_sf.
DR InterPro; IPR000719; Prot_kinase_dom.
DR InterPro; IPR017441; Protein_kinase_ATP_BS.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR008271; Ser/Thr_kinase_AS.
DR InterPro; IPR045274; WAK-like.
DR InterPro; IPR025287; WAK_GUB.
DR InterPro; IPR001878; Znf_CCHC.
DR PANTHER; PTHR27005:SF296; CALCIUM BINDING EGF DOMAIN CONTAINING PROTEIN, EXPRESSED; 1.
DR PANTHER; PTHR27005; WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21; 1.
DR Pfam; PF13976; gag_pre-integrs; 1.
DR Pfam; PF13947; GUB_WAK_bind; 2.
DR Pfam; PF00069; Pkinase; 1.
DR Pfam; PF14223; Retrotran_gag_2; 1.
DR Pfam; PF00665; rve; 1.
DR SMART; SM00181; EGF; 3.
DR SMART; SM00179; EGF_CA; 1.
DR SMART; SM00220; S_TKc; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57196; EGF/Laminin; 1.
DR SUPFAM; SSF56112; Protein kinase-like (PK-like); 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS01187; EGF_CA; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
DR PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
DR PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW ProRule:PRU10141}; Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Kinase {ECO:0000256|ARBA:ARBA00022777}; Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW ProRule:PRU10141}; Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT TRANSMEM 1184..1209
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 272..288
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 445..611
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 1262..1536
FT /note="Protein kinase"
FT /evidence="ECO:0000259|PROSITE:PS50011"
FT BINDING 1291
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU10141"
SQ SEQUENCE 1605 AA; 180091 MW; D59EFA8B4EF36F31 CRC64;
MAEKFSNKPH IFNGSDFDYW KKKMESYITS QGYDIWLKVN QPYEIPERID TPALKLEFEN
NCKARNIILN GISRSDFDRV SHLATANKIW KALNDFHTGT SNIKELRKDV FKKEYIKFEM
KLGESLDDYL ARFNKILSDL RSVDASYDVN YSQSEIARHF MNGLDMKVWD VKVTSIQKSI
DMNVLTLDIL YTKLKTYEMN ILSKNTDLKS TVLISSSGSS SESISLAAFA AFTALSDDQL
EEISEEDLVL AVNRISRDVS SIRIRRRGGP IRCFGCGQPN HIRSQCPKLG RVLVEFEDDG
EEDKSMNIAG VCLMAKSFED SDDDDETFLA RKENVWIVDS GCSRHMTGDK SWFSSLVRAS
RKDSIIFGDA STSTITATGS VKFSKDVMFW HRRLGHIGFD HLTRISGSDL IRGLPKLKKD
VDLVCSPCRH AKMVVCSHTP TFSVMTDAPG QLLHMDTVGP ARVQSVGGKW YVLVIVDDFS
RYSWVFFMVT KDEAFEHFKS LYLRLAIQLP GSLRTIRSDN GGEFKNASFE RFCNEKGLEH
QFSSPRVPQQ NGVVERKNRS LVEMARTMLD EYSTPRKFWA EAVNTACYIS NRVFLRSKLR
KTSYELRFGH TPKISHLRVF GCKCFVLKSG FLDKFESRSR DGLMLGYAAH SRGYRVLVLE
TNKIVETCEV TFDEASPGLS EVKRSVAQSR ILSNTPELTP SNTSLPSAAT LANCPKRCGD
VSFDYPFGIG DGCFRHPDFS LGCDSSTQPP KLFLQADDSV EISDNIDVSG QDVGDFLHFN
SFLATFTHVI PVKTGIDVYN FSWKSPGVSF TIVETMVIGV ASCDLDVFLI GQDGAAKLLC
TVACPNKEIA EMVYMQDCAG PGCYFLSSET PVQTVQLQVI RHKTNNTLRY SNLSMLWDRI
NISIGGPVVW SIVDQTRCSR NMEDNSKGDY ACVSNHSGCR TSVFRDTGYA CQCNSGYIGN
PYILDGCKHD SGYNPRPEKR NCSRHCGTVE VPFPFGLEEG CSARNLFRLT CSDETNSVVK
FNDFFQVMYI NVSEGLLGIK YNSTFQEQQF NMMVKMIISS DEPDLFVDPL ESASVQWAVA
NLTCQEAQQN TSGYACVSTS STCLNVLSSM EGFIGYRCTC SPGYHGNPYI QDGCEDINEC
QETPGICKGV CHNTVGNYSC TKCPDHTEYD MLRMQCTPKR KQSFYSGIVI GLSSGFGMLL
LGLSGMVLIR RWQRHAQKRL QRKYFQKNQG LLFEQLISAD ENASEKTKIF SLEELKKATN
NFDTTRILGC GGHGTVYKGI LSNQHVVAIK KAKVIRECEI NDFINEVAIL SQINHRNIVK
LFGCCLETEV PLLVYDFIPN GSLFGLLHPD SSSTIYLSWS DRLRIAAEAA GALCYLHSAA
SISIFHRDVK SSNILLDANY TAKVSDFGAS RSVPIDQSHV ITNVQGTFGY LDPEYYQTRQ
LNEKSDVYSF GVVLLELLLR KQPIFTTDSG MKQNLCSYFL SEIKTRPITD MVDAQVLEQA
SKEHIKEVAS LAEMCLKLKG EERPRMKQVE LTLQLLRTER MNSSQVDPAI DQEILPVLTE
GAIDPEKQAL ATNLDVHRAN VASQCLQISC HSLEREFLSS ASLPR
//
