ID J7ER28_9BRAS Unreviewed; 598 AA.
AC J7ER28;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:AEN85368.1};
DE Flags: Fragment;
GN Name=phyA {ECO:0000313|EMBL:AEN85368.1};
OS Pseuderucaria teretifolia.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Pseuderucaria.
OX NCBI_TaxID=763982 {ECO:0000313|EMBL:AEN85368.1};
RN [1] {ECO:0000313|EMBL:AEN85368.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22081414; DOI=10.3732/ajb.1100203;
RA Hall J.C., Tisdale T.E., Donohue K., Wheeler A., Al-Yahya M.A.,
RA Kramer E.M.;
RT "Convergent evolution of a complex fruit structure in the tribe Brassiceae
RT (Brassicaceae).";
RL Am. J. Bot. 98:1989-2003(2011).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JN584907; AEN85368.1; -; Genomic_DNA.
DR AlphaFoldDB; J7ER28; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 38..211
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 437..507
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEN85368.1"
FT NON_TER 598
FT /evidence="ECO:0000313|EMBL:AEN85368.1"
SQ SEQUENCE 598 AA; 66885 MW; 21B237978F9A8CF8 CRC64;
DFEPVKPYEV PMTAAGALQS YKLAAKAITR LQSLPSGSME RLCDTMVQEV FELTGYDRVM
AYKFHDDDHG EVVSEVTKPG LEPYLGLHYP ATDIPQAARF LFMKNKVRMI VDCNAKHVRV
LQDEKLSFDL TLCGSTLRAP HSCHLQYMAN MDSIASLVMA VVVNEEDGEG EAPDSTAPQK
RKRLWGLVVC HNTTPRFVPF PLRYACEFLA QVFAIHVNKE VELENQIVEK NILRTQTLLC
DMLMRDAPLG IVSQSPNIMD LVKCDGAALL YKDKVWKLGI TPSDYHLQEI ASWLCEYHTD
STGLSTDSLH DAGFPRALAL GDSVCGMAAV RISSKDMIFW FRSHTAAEVK WGGAKHDPDD
RDDARRMHPR SSFKAFLEVV KRRSLPWKDY EMDAIHSLQL ILRNAFKDGE TTDVNTKIIH
SKLNDLKIDG IQELEAVTSE MVRLIETATV PILAVDSDGL VNGWNTKIAE LTGLPVDEAI
GKHLLTLVED SSVEIVKRML ENALEGTEEQ NVQFEIKTHL SRADAGPISL VVNACASRDL
HENVVGVCFV AHDLTGQKTV MDKFTRIEGD YKAIIQNPNP LIPPIFGTDE FGWCSEWN
//
