ID J9F1A6_9SPIT Unreviewed; 1009 AA.
AC J9F1A6;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE SubName: Full=Pre-mRNA splicing factor, putative {ECO:0000313|EMBL:EJY72031.1};
GN ORFNames=OXYTRI_06972 {ECO:0000313|EMBL:EJY72031.1};
OS Oxytricha trifallax.
OC Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY72031.1};
RN [1] {ECO:0000313|EMBL:EJY72031.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JRB310 {ECO:0000313|EMBL:EJY72031.1};
RX PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S., Fulton R.S.,
RA Ly A., McGrath S., Haub K., Wiggins J.L., Storton D., Matese J.C.,
RA Parsons L., Chang W.J., Bowen M.S., Stover N.A., Jones T.A., Eddy S.R.,
RA Herrick G.A., Doak T.G., Wilson R.K., Mardis E.R., Landweber L.F.;
RT "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome
RT with 16,000 Tiny Chromosomes.";
RL PLoS Biol. 11:E1001473-E1001473(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJY72031.1}.
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DR EMBL; AMCR01015479; EJY72031.1; -; Genomic_DNA.
DR AlphaFoldDB; J9F1A6; -.
DR EnsemblProtists; EJY72031; EJY72031; OXYTRI_06972.
DR OrthoDB; 655233at2759; -.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR010491; PRP1_N.
DR InterPro; IPR045075; Syf1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR PANTHER; PTHR11246:SF1; PRE-MRNA-PROCESSING FACTOR 6; 1.
DR Pfam; PF06424; PRP1_N; 1.
DR Pfam; PF14559; TPR_19; 1.
DR SMART; SM00386; HAT; 10.
DR SUPFAM; SSF48452; TPR-like; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 11..206
FT /note="PRP1 splicing factor N-terminal"
FT /evidence="ECO:0000259|Pfam:PF06424"
FT REGION 69..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 154..185
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 700..751
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 99..113
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1009 AA; 115459 MW; CF3E1727028A8FBE CRC64;
MVFRKPNFGP PPENYIAGLG RGASGFVTRA DFGPSKVGVP TGTAQPGELQ VNPQPINNQY
LSFHFEYRPQ GAPAQSGPGV APQMRQAPTA AMRELTSKGG QRGQDKEQDF SDANFDEWSG
FGGSLFTGGA DDAEDKEADN LFQRVDEFMD GRRKKKREEK FKEQEKKLEK DKKDIQTQFS
DLKRQLVNVS RIEWEALPDA PDLVKRTKRQ KIDNFQRYTP VPDSVIDQAR LDSQTNTFID
PNSGASTQLI NQANAASTTG FSSIMNGGMQ TSIGDVGMAR GQLLNLKLAS AESVISNVAK
QSTSTFDRDG YMTALNSQQF NNLHDINDFK KARKMFKSVI QQNPQNSMGW IAAARIEHLD
GKVQEARNII NQACHELPND EDIWLEAAKL CPPEKVQALL AKAISNIPKS KKLWQMAALK
EQEVEIKKQI YQRALEQLPT DLELWKESIQ LASPDEAKTL LYRAVKCVPD STDLWLALAR
LESYENARTV LNEAREAVPT DHTIWVNAAK LEEAQGNNSL VDKIINRAIK KLSKNVNLKR
DQWLREAVQA EESGSLITCR AIIKETMHFG MEDITNTYQD EAEQNRQIRN IWKENAEECI
RQGAYETARA LYFNALREYP KKKSIWFSAI KLEEEYGSKE NQDDLLRRAR EETDTVFFYL
KHAKFTWKNQ RNAIKTAQIL NEGYKRHPDS EDIVLALQKF YRENNQLKEA ETLLQQATEQ
IPTSERVAMQ AVQLQRELMN LQKALSLVDD ALKQHRTIHK LWLIKAHILQ DLGSQAAKQE
NEVQKVSYYE QSRKVYDEAL TVEEVKTQRI IWLDYARFET EQEAFTRART VLQKARIRMP
NDDEIWLSSV RLEIKSDNLK IAQNLLSQAL QKCPNSGRLW AQLIEMEPSA TRKTQSFNAA
TKVGNDSDLF LAVAKVLWSE MKTEKMKKWI KNAIAINPDN GDAWALYYKY EMEFGNGETQ
KEVVDKFLEA EPRHGEMWAR EVKKVENWRR DKVELLKKVS GEIKMFEQI
//
