ID J9RI97_POPNI Unreviewed; 41 AA.
AC J9RI97;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=glycine hydroxymethyltransferase {ECO:0000256|ARBA:ARBA00012256};
DE EC=2.1.2.1 {ECO:0000256|ARBA:ARBA00012256};
DE Flags: Fragment;
GN Name=SHMT3 {ECO:0000313|EMBL:AFR41525.1};
OS Populus nigra (Lombardy poplar).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3691 {ECO:0000313|EMBL:AFR41525.1};
RN [1] {ECO:0000313|EMBL:AFR41525.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SHMT3_08-11896 {ECO:0000313|EMBL:AFR41525.1}, SHMT3_08-12002
RC {ECO:0000313|EMBL:AFR41528.1}, SHMT3_08-12108
RC {ECO:0000313|EMBL:AFR41530.1}, SHMT3_08-12161
RC {ECO:0000313|EMBL:AFR41523.1}, SHMT3_08-12214
RC {ECO:0000313|EMBL:AFR41526.1}, SHMT3_08-12267
RC {ECO:0000313|EMBL:AFR41533.1}, SHMT3_08-12320
RC {ECO:0000313|EMBL:AFR41537.1}, SHMT3_08-12373
RC {ECO:0000313|EMBL:AFR41524.1}, SHMT3_08-12426
RC {ECO:0000313|EMBL:AFR41534.1}, SHMT3_08-12479
RC {ECO:0000313|EMBL:AFR41536.1}, SHMT3_08-12532
RC {ECO:0000313|EMBL:AFR41532.1}, SHMT3_08-12585
RC {ECO:0000313|EMBL:AFR41531.1}, SHMT3_08-12638
RC {ECO:0000313|EMBL:AFR41535.1}, SHMT3_08-12691
RC {ECO:0000313|EMBL:AFR41529.1}, and SHMT3_08-12744
RC {ECO:0000313|EMBL:AFR41527.1};
RX PubMed=23157484; DOI=10.1111/nph.12003;
RA Guerra F.P., Wegrzyn J.L., Sykes R., Davis M.F., Stanton B.J., Neale D.B.;
RT "Association genetics of chemical wood properties in black poplar (Populus
RT nigra).";
RL New Phytol. 197:162-176(2013).
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- PATHWAY: One-carbon metabolism; tetrahydrofolate interconversion.
CC {ECO:0000256|ARBA:ARBA00004777}.
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DR EMBL; JX554846; AFR41523.1; -; Genomic_DNA.
DR EMBL; JX554847; AFR41524.1; -; Genomic_DNA.
DR EMBL; JX554848; AFR41525.1; -; Genomic_DNA.
DR EMBL; JX554849; AFR41526.1; -; Genomic_DNA.
DR EMBL; JX554850; AFR41527.1; -; Genomic_DNA.
DR EMBL; JX554851; AFR41528.1; -; Genomic_DNA.
DR EMBL; JX554852; AFR41529.1; -; Genomic_DNA.
DR EMBL; JX554853; AFR41530.1; -; Genomic_DNA.
DR EMBL; JX554854; AFR41531.1; -; Genomic_DNA.
DR EMBL; JX554855; AFR41532.1; -; Genomic_DNA.
DR EMBL; JX554856; AFR41533.1; -; Genomic_DNA.
DR EMBL; JX554857; AFR41534.1; -; Genomic_DNA.
DR EMBL; JX554858; AFR41535.1; -; Genomic_DNA.
DR EMBL; JX554859; AFR41536.1; -; Genomic_DNA.
DR EMBL; JX554860; AFR41537.1; -; Genomic_DNA.
DR AlphaFoldDB; J9RI97; -.
DR UniPathway; UPA00193; -.
DR GO; GO:0004372; F:glycine hydroxymethyltransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0019264; P:glycine biosynthetic process from serine; IEA:InterPro.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0035999; P:tetrahydrofolate interconversion; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR001085; Ser_HO-MeTrfase.
DR InterPro; IPR039429; SHMT-like_dom.
DR PANTHER; PTHR11680; SERINE HYDROXYMETHYLTRANSFERASE; 1.
DR PANTHER; PTHR11680:SF64; SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL; 1.
DR Pfam; PF00464; SHMT; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
PE 4: Predicted;
KW Methyltransferase {ECO:0000313|EMBL:AFR41525.1};
KW Transferase {ECO:0000313|EMBL:AFR41525.1}.
FT DOMAIN 1..41
FT /note="Serine hydroxymethyltransferase-like"
FT /evidence="ECO:0000259|Pfam:PF00464"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AFR41525.1"
FT NON_TER 41
FT /evidence="ECO:0000313|EMBL:AFR41525.1"
SQ SEQUENCE 41 AA; 4485 MW; A166AE442B354FF1 CRC64;
NVQSLSGSPA NFQVYTALLK PHERIMALDL PHGGHLSHGY Q
//
