ID K0D9T4_MAIZE Unreviewed; 307 AA.
AC K0D9T4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 22-FEB-2023, entry version 48.
DE SubName: Full=C3H53 C3H type transcription factor {ECO:0000313|EMBL:AFT82709.1};
DE Flags: Fragment;
OS Zea mays subsp. mays (maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=381124 {ECO:0000313|EMBL:AFT82709.1};
RN [1] {ECO:0000313|EMBL:AFT82709.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=18987217; DOI=10.1104/pp.108.128579;
RA Yilmaz A., Nishiyama M.Y.Jr., Fuentes B.G., Souza G.M., Janies D., Gray J.,
RA Grotewold E.;
RT "GRASSIUS: a platform for comparative regulatory genomics across the
RT grasses.";
RL Plant Physiol. 149:171-180(2009).
RN [2] {ECO:0000313|EMBL:AFT82709.1}
RP NUCLEOTIDE SEQUENCE.
RA Gray J., Doseff A., Grotewold E.;
RT "Maize Transcription Factor ORFeome (TFome) Collection.";
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; JX428528; AFT82709.1; -; mRNA.
DR AlphaFoldDB; K0D9T4; -.
DR SMR; K0D9T4; -.
DR GO; GO:0089701; C:U2AF complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR CDD; cd12539; RRM_U2AF35B; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR InterPro; IPR009145; U2AF_small.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR12620:SF40; SPLICING FACTOR U2AF SMALL SUBUNIT B; 1.
DR PANTHER; PTHR12620; U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF00642; zf-CCCH; 2.
DR PRINTS; PR01848; U2AUXFACTOR.
DR SMART; SM00361; RRM_1; 1.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 2: Evidence at transcript level;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 12..40
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 44..146
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 148..175
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 12..40
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 148..175
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 186..307
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 187..203
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 204..227
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 234..307
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 307
FT /evidence="ECO:0000313|EMBL:AFT82709.1"
SQ SEQUENCE 307 AA; 35568 MW; BA4F2738F587EAED CRC64;
MAEHLASIFG TEKDRVNCPF YFKIGACRHG DRCSRLHNRP TISPTLVLAN MYQRPDMITP
GVDAQGQPID PEKMQEHFED FYEDIYEELG KFGEIENLNV CDNLADHMIG NVYVQFREEE
QAAAAYNALQ GRFYSGRPII VEYSPVTDFR EATCRQFEEN SCNRGGYCNF MHVKQIGRDL
RRKLYGRSAS RRYHGRSRSR SPPPQRRGHR DRDDYHHRDR DDYRGGGGGG RGRGSRYDRY
DDGAGRGGRH GRYDDGAGRG GRHDRYDDGG RRRHGSPSRR ARSPVRESSE ERRAKIEQWN
REREGKQ
//
