ID K0DVB7_9BURK Unreviewed; 490 AA.
AC K0DVB7;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 24-JAN-2024, entry version 60.
DE SubName: Full=PAS modulated fis family sigma-54 specific transcriptional regulator {ECO:0000313|EMBL:AFT88835.1};
GN ORFNames=BUPH_01386 {ECO:0000313|EMBL:AFT88835.1};
OS Paraburkholderia phenoliruptrix BR3459a.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Paraburkholderia.
OX NCBI_TaxID=1229205 {ECO:0000313|EMBL:AFT88835.1, ECO:0000313|Proteomes:UP000010105};
RN [1] {ECO:0000313|EMBL:AFT88835.1, ECO:0000313|Proteomes:UP000010105}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BR3459a {ECO:0000313|EMBL:AFT88835.1,
RC ECO:0000313|Proteomes:UP000010105};
RX PubMed=23144415; DOI=10.1128/JB.01821-12;
RA de Oliveira Cunha C., Goda Zuleta L.F., Paula de Almeida L.G.,
RA Prioli Ciapina L., Lustrino Borges W., Pitard R.M., Baldani J.I.,
RA Straliotto R., de Faria S.M., Hungria M., Sousa Cavada B., Mercante F.M.,
RA Ribeiro de Vasconcelos A.T.;
RT "Complete Genome Sequence of Burkholderia phenoliruptrix BR3459a (CLA1), a
RT Heat-Tolerant, Nitrogen-Fixing Symbiont of Mimosa flocculosa.";
RL J. Bacteriol. 194:6675-6676(2012).
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DR EMBL; CP003864; AFT88835.1; -; Genomic_DNA.
DR RefSeq; WP_014972684.1; NC_018672.1.
DR AlphaFoldDB; K0DVB7; -.
DR STRING; 1229205.BUPH_01386; -.
DR GeneID; 27800116; -.
DR KEGG; bpx:BUPH_01386; -.
DR PATRIC; fig|1229205.11.peg.5354; -.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_0_6_4; -.
DR Proteomes; UP000010105; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF99; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 19..60
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 161..392
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 490 AA; 53014 MW; 673FFB3A881F61DB CRC64;
MMNDWAGLPA TYGDVLRRAM DSLFRTFENF SEGTFIVDAE ARVVWINKRY AARFGFADPE
QAIGRDCEAV IPNSLMREVV KTGKPILLDI LETDREPLVV TRLPLKDDAG ETVGAVGFAL
FDELKALTPL FSHYSRVQEE LIATRQSLAQ ARRAKYTFGS FVGTSTASLE VKRQARRAAQ
LESPVLLLGE TGTGKELLAH AIHGGSARAN QPLVTVNVAA IPDTLLEVEF FGAAPGAYTG
ADRKGRVGKF ELANGGTLFL DEIGDMPLPL QGKLLRVLQD KEFEPLGSNR IVRADVRIIA
ATSADLPALV AAGRFRADLF YRLNVLTIHA PPLRERASDI EALAYAMLED LSSQARGGSH
YELQDDALRL LCSYGWPGNV RELRNTLERA VMLSDSERID ARALAPFIGA GQNGAPGAGL
PPPDGNAQVA AENGQAAQPS SWSDAMAAFE KRFLSEVLRA NGGRVIETAA QIGMGRATLY
KKIAAHGIEV
//
