ID K0IIE8_NITGG Unreviewed; 313 AA.
AC K0IIE8;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Putative transcription initiation factor IIB {ECO:0000313|EMBL:AFU58773.1};
GN Name=tfb7 {ECO:0000313|EMBL:AFU58773.1};
GN OrderedLocusNames=Ngar_c18400 {ECO:0000313|EMBL:AFU58773.1};
OS Nitrososphaera gargensis (strain Ga9.2).
OC Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales;
OC Nitrososphaeraceae; Nitrososphaera.
OX NCBI_TaxID=1237085 {ECO:0000313|EMBL:AFU58773.1, ECO:0000313|Proteomes:UP000008037};
RN [1] {ECO:0000313|EMBL:AFU58773.1, ECO:0000313|Proteomes:UP000008037}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ga9.2 {ECO:0000313|Proteomes:UP000008037};
RX PubMed=23057602; DOI=10.1111/j.1462-2920.2012.02893.x;
RA Spang A., Poehlein A., Offre P., Zumbragel S., Haider S., Rychlik N.,
RA Nowka B., Schmeisser C., Lebedeva E.V., Rattei T., Bohm C., Schmid M.,
RA Galushko A., Hatzenpichler R., Weinmaier T., Daniel R., Schleper C.,
RA Spieck E., Streit W., Wagner M.;
RT "The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis:
RT insights into metabolic versatility and environmental adaptations.";
RL Environ. Microbiol. 14:3122-45(2012).
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DR EMBL; CP002408; AFU58773.1; -; Genomic_DNA.
DR AlphaFoldDB; K0IIE8; -.
DR STRING; 1237085.Ngar_c18400; -.
DR KEGG; nga:Ngar_c18400; -.
DR HOGENOM; CLU_043736_0_1_2; -.
DR InParanoid; K0IIE8; -.
DR Proteomes; UP000008037; Chromosome.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR Gene3D; 1.10.472.170; -; 1.
DR Gene3D; 1.10.472.10; Cyclin-like; 1.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR013150; TFIIB_cyclin.
DR InterPro; IPR013137; Znf_TFIIB.
DR PANTHER; PTHR11618:SF13; TRANSCRIPTION INITIATION FACTOR IIB; 1.
DR PANTHER; PTHR11618; TRANSCRIPTION INITIATION FACTOR IIB-RELATED; 1.
DR Pfam; PF08271; TF_Zn_Ribbon; 1.
DR Pfam; PF00382; TFIIB; 2.
DR PRINTS; PR00685; TIFACTORIIB.
DR SUPFAM; SSF47954; Cyclin-like; 2.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51134; ZF_TFIIB; 1.
PE 4: Predicted;
KW Initiation factor {ECO:0000313|EMBL:AFU58773.1};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00469};
KW Protein biosynthesis {ECO:0000313|EMBL:AFU58773.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000008037};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00469};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00469}.
FT DOMAIN 17..48
FT /note="TFIIB-type"
FT /evidence="ECO:0000259|PROSITE:PS51134"
SQ SEQUENCE 313 AA; 34490 MW; 27B91E99B2D0BA81 CRC64;
MYAKAGNMSY KLASEQAADV CALCNSKSIV FDSETSEAVC SSCGMVIKDN IESMGPEWRS
YSGEDIESKS RTGMPSSLAF HDMGLSTFIS YSNVDANGVA ISAEQRSKVQ RMRRWNKISS
NNRSYHRNLK NAFAILSTIK DKLSLSDTLI EKAAYNYRKA LDKKIIKGRS IRALIVAAVY
AACRDLSVPR TLEEISAAAN TDAIFAGKCY RLLVQNLDLR LPVIDSNKYL ARISNKAKVS
EKTYRNALEM LSTIKDNPIS HGKDPNALAV AVLYAACLKE GENVSQAQVA VAGDISIVTL
RKRFQDVRKI FPS
//
