ID K0JCF4_9CARY Unreviewed; 312 AA.
AC K0JCF4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Phytochrome C {ECO:0000313|EMBL:CCE60599.1};
DE Flags: Fragment;
GN Name=phyC {ECO:0000313|EMBL:CCE60599.1};
OS Tephrocactus nigrispinus.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC Caryophyllales; Cactineae; Cactaceae; Opuntioideae; Tephrocactus.
OX NCBI_TaxID=867531 {ECO:0000313|EMBL:CCE60599.1};
RN [1] {ECO:0000313|EMBL:CCE60599.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=O-04 {ECO:0000313|EMBL:CCE60599.1};
RA Ritz C.;
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CCE60599.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=O-04 {ECO:0000313|EMBL:CCE60599.1};
RX PubMed=22877645; DOI=10.1016/j.ympev.2012.07.027;
RA Ritz C.M., Reiker J., Charles G., Hoxey P., Hunt D., Lowry M., Stuppy W.,
RA Taylor N.;
RT "Molecular phylogeny and character evolution in terete-stemmed Andean
RT opuntias (Cactaceae-Opuntioideae).";
RL Mol. Phylogenet. Evol. 65:668-681(2012).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; HE611338; CCE60599.1; -; Genomic_DNA.
DR AlphaFoldDB; K0JCF4; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..153
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT REGION 293..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CCE60599.1"
FT NON_TER 312
FT /evidence="ECO:0000313|EMBL:CCE60599.1"
SQ SEQUENCE 312 AA; 35039 MW; 81A0B92CA80FCDEE CRC64;
GYDRVMVYKF HEDEHGEVIS EYRTPDLEPY LGLHYPATDI PQASRFLFLK NRVRMICDCL
AAPIKVIQDK KLAQPLSLGG SILRAPHGCH AQYMANMGSI ASLVMAVTIN EDEDEVKSDP
STGKRLWGLV VCHHTSSRFI PFPLRYACEL LVQVFGIQIN KEVELAAQIR ESHILRIQTV
LCDMLLRDSP VAIVTQSPNV MDLVKCDGVA LYYKGQVWLL GITPTEEQIK NITQWLLEYH
GTTKGLSTDS LMEAGYPGAS ELGDAVCGMA AVRISSKDVL FWFRSHSARE IKRGGAKHDP
VDRDDRRKMN PR
//
