ID K0R6D9_THAOC Unreviewed; 1704 AA.
AC K0R6D9;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=MYND-type domain-containing protein {ECO:0000259|PROSITE:PS50865};
DE Flags: Fragment;
GN ORFNames=THAOC_32808 {ECO:0000313|EMBL:EJK48395.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK48395.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK48395.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK48395.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK48395.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AGNL01045890; EJK48395.1; -; Genomic_DNA.
DR EnsemblProtists; EJK48395; EJK48395; THAOC_32808.
DR eggNOG; KOG1550; Eukaryota.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR PANTHER; PTHR11102:SF163; SEL1 DOMAIN PROTEIN REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF08238; Sel1; 3.
DR Pfam; PF01753; zf-MYND; 1.
DR SMART; SM00368; LRR_RI; 2.
DR SMART; SM00671; SEL1; 3.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR SUPFAM; SSF52047; RNI-like; 1.
DR PROSITE; PS50088; ANK_REPEAT; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 3: Inferred from homology;
KW ANK repeat {ECO:0000256|PROSITE-ProRule:PRU00023};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 52..93
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT REPEAT 1486..1519
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 456..515
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1053..1225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1663..1704
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 515..571
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 480..505
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1057..1081
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1092..1116
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1206..1225
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EJK48395.1"
SQ SEQUENCE 1704 AA; 188027 MW; 8B29470BFDC948DE CRC64;
SGELTSKVSK AFGSRSETRS SESTHQAVAG RAGILNLTMS CVPVADVSDE ICANCGKQGS
DTVKLKNCTA CRLVKYCGVD CQRAHRKQHK KACKQRAAEL KDEQLYSQGH ERPEGDFCTI
CTLPIPLPVD NHSGFHLCCT KRICNGCNLA ARKRGMLDCP FCRTPHSDND ADNLAMIRAR
VAKRDPVAIT FLGYKYYHGE LGLKKDMRKA VELFTEAAEL GSIDALFNLG IAYDTGKGDE
QDMAKAVEFY EKAAMQGHVG SRYNLGCDEG KKGNHDRALR HLLISAKMGD KESLETIKRV
FMRGQATKEQ YAEALKGYQD AVEGMKSHDR DEANRFFALV DARKQTSTRS RNGKVLLGRL
QDAEDPPPPP RACDAPPLAA RTSLSQNEWI WAEESNSRRG KPRSKRRFYL AFTLTKLSKD
RASSVLGSVT HTRWLRRGGQ NVLCKGLSET EASASHAVFV GRGGPQSHRG PGKGGRSRRS
GLPKRPDQPA MEVVPRKRAK ACPDDDTADG GAAASTAAQQ QIAELRAELA KCKREHDQVV
RDLSRRHDQA VRRLEGEKRE LEERHAQMVR DLKGSYSDAL EWAYTVKAIP RDHWLEKGHT
GEYADAMEEF LVSFTDTIKE LRTGELWTGT RSPRIDIRFA LFDEEDHEVT ADHDDVLMPY
WMELAKALIH WSEYHASDES LAITIDHIET PDAVLDVLRP AIKQSKVKHI AIDDDGTPKP
WKLAEFIDDI IQTNHTVTGV GFTGVMLSNE EWGTICNAIR IRHQSVAMEI FQVRRCFVDG
MNMEVIKKIL TSNSAEVDLG TNRMFSREVS IIAQCLNSNP PLAWLSLRGN HFNDADAAVL
ANSLSSNTNL RALNVDGNNF TEEGRVAFLR AIFDVSSLAS CAASNHNCQV FGLEKDISAL
NCYNEDYPNK LEKIFAMLAL SGDDSFINTA LLRGIPTYLM PKILDMAGDQ EEEGNSKITD
LYLELTGSKR CQNHDVWDNL EHSRSQSCVY DLIRSWPPIR ADGNLPEYST RDIFLILPWR
SKSIFGCPGT VSPHSVDLFD PFLLRCTVEN PPGVLPGEDG PTAPSPGLRP PRRPPLAAPG
RGGRPCPSRS WTSAGRAGNS SRPSRHSSTT GRRTNSDPPL SREDVVVRPP TDGAGTREGR
RSHPFQDLCE IGARPSQRIL RVRRGPQSRP NPPAGEGPQG PEKGAAQSGV PTEPKTRRRG
RALQTEDFQQ AETANPVPPS SRTSIGSVKN EWIWAEESNS RRGKPRSKRR FYLAFTLTKL
SKDRASSVLG LVTLTPSFVA AAKMFCARAS ARLRPEPHTQ YSLGGAGPNL TEVLGRTIIG
AHTLELVGIS SLSAGGVLAA MDDSGHGNNE CGICLGESGP IPSRSRADIP SARTASAEEE
GRRKRCPLCR GVVPPSQEQV ANYQMVKSLM KNTSVPYYKH CLREVKQFEA EYGEDSDGTM
IEYDSEFIHL PLYVFNYFYK GNLRAVLQWL GKGNLKERVN AKHEGGGNAG LLYAAAIEKQ
HDLMSYLLLN GADVNILDSI CASVLTQCCL EEEKPSESVR LLLTWGKANV EIANLISFEL
GGRRCEIVSA PDSREDLVGK TCVVEEYVGN ADQYRVRMEF TNEELLLGTG NLERRDRSPQ
DPGYYVKSLV SDVGELSKVD PDAEAKAEQA AADLLAELGL EDLEGPRSSA SKKNQLAASG
KKKNAEAKRR DGSENPTNSL FFTV
//
