ID K0TJ32_THAOC Unreviewed; 471 AA.
AC K0TJ32;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=MYND-type domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=THAOC_08041 {ECO:0000313|EMBL:EJK70587.1};
OS Thalassiosira oceanica (Marine diatom).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=159749 {ECO:0000313|EMBL:EJK70587.1, ECO:0000313|Proteomes:UP000266841};
RN [1] {ECO:0000313|EMBL:EJK70587.1, ECO:0000313|Proteomes:UP000266841}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1005 {ECO:0000313|EMBL:EJK70587.1,
RC ECO:0000313|Proteomes:UP000266841};
RX PubMed=22835381; DOI=10.1186/gb-2012-13-7-r66;
RA Lommer M., Specht M., Roy A.S., Kraemer L., Andreson R., Gutowska M.A.,
RA Wolf J., Bergner S.V., Schilhabel M.B., Klostermeier U.C., Beiko R.G.,
RA Rosenstiel P., Hippler M., Laroche J.;
RT "Genome and low-iron response of an oceanic diatom adapted to chronic iron
RT limitation.";
RL Genome Biol. 13:R66-R66(2012).
CC -!- SIMILARITY: Belongs to the sel-1 family.
CC {ECO:0000256|ARBA:ARBA00038101}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK70587.1}.
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DR EMBL; AGNL01008341; EJK70587.1; -; Genomic_DNA.
DR AlphaFoldDB; K0TJ32; -.
DR EnsemblProtists; EJK70587; EJK70587; THAOC_08041.
DR Proteomes; UP000266841; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR11102; SEL-1-LIKE PROTEIN; 1.
DR Pfam; PF08238; Sel1; 2.
DR Pfam; PF01753; zf-MYND; 1.
DR SMART; SM00671; SEL1; 2.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS01360; ZF_MYND_1; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000266841};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 179..220
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
FT DOMAIN 245..291
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EJK70587.1"
SQ SEQUENCE 471 AA; 50700 MW; 4E1C78904582BFD1 CRC64;
AERAVDDALA GELSPGPTLD LSNPASAPGP GGPSWALAPT MSEAPKSASR SLPARLNDCC
GRVEALGPPR LEQAADAAFE GAWKCLSVLV ARPSVREVVN IVWATVVTFT ALPPSWSHRA
IAPRLTRCPP VESGTANIGV RRQCRQTLSM PRIPLALEVA AWFATMATGC VMAAAADVCA
NCGREGGEGV KLKNCTACLL VKYCGVDCQK AHRKIHKKAC KERAAELKDE RLYGQGHERP
ETEFCPICAQ PVPIPTEEHS VVNSCCTKMV CDGCVLAGVK LGIMNACPFC RTPTHKDEAE
ALAMVQTRVK KKDPEAIRYL GYQYMEGYME GGLGLEKDST RAIELWTEAA ELGSAGAYYS
LGLAYLNGDG VEQDVARGVS FYEKAAMLGN STARHNLGCY ECERGRYDRG VRHLLISAKM
GSEKSLANIK ELFKGGDATK TQYAEALKGY QAAVEEMKSP DRKEAVSFRF G
//
