ID K3YG58_SETIT Unreviewed; 910 AA.
AC K3YG58;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE RecName: Full=General transcription factor 3C polypeptide 3 {ECO:0008006|Google:ProtNLM};
GN Name=101754240 {ECO:0000313|EnsemblPlants:KQL00430};
GN ORFNames=SETIT_6G027800v2 {ECO:0000313|EMBL:RCV29631.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL00430, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV29631.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL00430,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV29631.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV29631.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV29631.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL00430}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL00430};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02003504; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003533; RCV29631.1; -; Genomic_DNA.
DR RefSeq; XP_004972601.1; XM_004972544.2.
DR AlphaFoldDB; K3YG58; -.
DR STRING; 4555.K3YG58; -.
DR EnsemblPlants; KQL00430; KQL00430; SETIT_013226mg.
DR GeneID; 101754240; -.
DR Gramene; KQL00430; KQL00430; SETIT_013226mg.
DR KEGG; sita:101754240; -.
DR eggNOG; KOG2076; Eukaryota.
DR HOGENOM; CLU_002391_1_0_1; -.
DR InParanoid; K3YG58; -.
DR OMA; SSPNMKF; -.
DR OrthoDB; 379736at2759; -.
DR Proteomes; UP000004995; Chromosome VI.
DR GO; GO:0000127; C:transcription factor TFIIIC complex; IBA:GO_Central.
DR GO; GO:0006383; P:transcription by RNA polymerase III; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR039340; Tfc4/TFIIIC-102/Sfc4.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR23082:SF0; GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 3; 1.
DR PANTHER; PTHR23082; TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED; 1.
DR Pfam; PF14559; TPR_19; 3.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00028; TPR; 6.
DR SUPFAM; SSF48452; TPR-like; 4.
DR PROSITE; PS50005; TPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 174..207
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 242..275
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 430..463
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1..96
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 116..139
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 22..40
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 66..96
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..132
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 910 AA; 103592 MW; 01535126D942264D CRC64;
MSAVTEDGVQ RASAAEVGDG GRDGDEDFEE DEEDGFEFGD AEEAMQCVEM AGRSTGAGAM
RAQAHDYEAL AERKRKALAE EQPQREGSKR PRPDDLSEAE AATMFDQLME GFGLRRKRRS
KDGKKRGRKK GTKNKGSPEV IKKLGDATLL FAEEKFDEAI PILHEIVRIA PNLPDSYYLL
GSIYSETGEL DKAINFLMLA AYVSPKDASL WKKLIPLAKK KEDASLARHC ILKAMRADPE
DVDLKYLCGD MYRNLRDYQK AAEIYEQIVR IYPANVAVRK VAAQMYRECG QIDKAINLLE
DYVSTQTTNI DWSVLDLLIS LYLRNNALSE ALKQIEKARL QLRSQQKLPI QLLAKEVICH
AYLGDMKHAE IFLRDVHLEP SKDNTDVIKE LATNLETMGL YEYAVKFYLM IGDVANHNAG
SLYVDHKEMG NSYVKVAQCY MVLGDKRNAI PYFYKALQSM KDNIDIRLTL SSLLIDEGKT
DEAVTLLSPP KNQELHSANT PDQHKPWWCD GKVKMKLANI YYNKGNLEDF VDTIFHPILE
TLNVEYANRK IKPMRKLPNT VLHERVKVLG EPRPDSIFQG LRPIASPGEL QKANRAKKLI
EKRAASNEEL KPNDLRRTKQ VPPVPDLLTN MEHHQLVLNL CRTLALLQRY WDALQIINRT
LKLGNDVLTN DNKEELRSLG AQIAYRAPDP SHGFKYVRYV VQQHPYSLSA WNSYYKVISR
IEDRFPHHFK YILRTREEKP DCVPPIIISG HRFTAISQHQ SAARDYLEAY KLDPENPLIN
LCVGTALISL ALGFRLQNKN QCIVQAFAFL YRYLRLCGES QEALYNIARA YHHIGLNTLA
AVYYEKALAV EEEDHPIPKL PYEAGSCAQE DLRPGYCDVR REAAFNLHLI YKKSGATDLA
RQILKTYCTV
//
