ID K3Z5A5_SETIT Unreviewed; 531 AA.
AC K3Z5A5;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL15316, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQL15316, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL15316,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQL15316}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL15316};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02001685; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K3Z5A5; -.
DR EnsemblPlants; KQL15316; KQL15316; SETIT_021708mg.
DR Gramene; KQL15316; KQL15316; SETIT_021708mg.
DR Proteomes; UP000004995; Chromosome III.
DR ExpressionAtlas; K3Z5A5; baseline.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12698; RRM3_PTBPH3; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR034797; PTBPH3_RRM3.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF18; SMOOTH, ISOFORM T; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 1.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 344..418
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 454..528
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 277..300
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 277..298
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 531 AA; 58941 MW; 5EC59B6B5A5D4F99 CRC64;
MSMCRPDGPD GRMGQLGQSR DKWACAGRIR MALDVHPSSI SFSRRPLCAP LPLPPPSWPS
FPGGDDWASG GALPSTVPGP SPATITHQCG RMAEPSKVIH IRNVGHEIAE SDLLQLLQPF
GLVSKIVMLR AKNQMEDIHA SVTALQYYSS VQPSVRGRNV YMQFSSHQEL TTDQSSHGRN
SDQESEPNRI LLVTIHHMIY PITVEVLHQV FKAYGFVEKI VTFQKSAGFQ ALIQYHSRQE
AVEAFGSLHG RNIYDGCCQL DIQYSNLSEL QVHYNNDRSR DFTNPSLPTE QRPRTSQQGY
PDPAGLYAFQ QPGASYAQMG RAAMIAAAFG GTLPHGVTGT NERCTLIVSN LNTDKIDEDK
LFNLFSLYGN IVRIKILRNK PDHALVEMAD GLQAELAVHY LKGAILFGKK LEVNYSKYPN
ITPAPDAHDY LNSSLNRFNS NVVKNYRHCC APTKMIHISA LPQEITEEAI LNHVSEHGSV
INTKLFEVNG KRQALVMFET EEEATEALVS KHASTLEGNT IRISFSQMQS I
//
