ID K3ZCQ0_SETIT Unreviewed; 786 AA.
AC K3ZCQ0;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=101772126 {ECO:0000313|EnsemblPlants:KQL13597};
GN ORFNames=SETIT_3G085000v2 {ECO:0000313|EMBL:RCV15778.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL13597, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV15778.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL13597,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV15778.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV15778.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV15778.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL13597}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL13597};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02001462; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003530; RCV15778.1; -; Genomic_DNA.
DR RefSeq; XP_004963485.1; XM_004963428.2.
DR AlphaFoldDB; K3ZCQ0; -.
DR EnsemblPlants; KQL13597; KQL13597; SETIT_024327mg.
DR GeneID; 101772126; -.
DR Gramene; KQL13597; KQL13597; SETIT_024327mg.
DR KEGG; sita:101772126; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; K3ZCQ0; -.
DR OMA; TAFLWNT; -.
DR OrthoDB; 448458at2759; -.
DR Proteomes; UP000004995; Chromosome III.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 7.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 84..118
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 190..224
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 291..325
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 392..426
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 492..526
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 593..627
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 628..662
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 786 AA; 85969 MW; 346669D1EE9B3A66 CRC64;
MRPPDPATPF TAASLHEHVL RLHQCGGGGG GSLLLPRTHA ASLVSGALAA SLPLAGALLL
SYAALRDVPS ARLVLRHHPL RLRSAFLWNS LSRALASADL PADALREYNR MVRSGVRPDD
RTFPFALHAA AAAVAAGEHP AKGLELHAAA LRRGLLLSDV FAGNTLVTFY AACGRAADAR
RVFDEMPARD VVSWNSLVSA FLTNGMLDDA KRAVVGMMRS RVPVNVASLV SLVPACGAEQ
DERFGLCLHG LALKSGLDSV VNLSNALVDM YGKFGDLEAS MRVFNGMPEK NEVSWNSALG
CFVHAGFYED VLELFRAMSE QGVTPGSVTL SSLLPALVDL GYFHLGKEVH GYSIRRAMDL
DIFIANSLMD MYAKFGCSEK ASAIFEKIEA RNVVSWNAMI ANLAQNGAES EAFRLVIEMQ
KSGECPNSFT IVNLLPACSR VASLKIGKQI HAWSIRRSLM SDLFVSNALI DAYAKCGQLS
SARNIFDRSE KDDVSYNTLI GGFSQSPCCF ESLHLFEQMR SAGVEYDAVS FMGCLSACAN
LSAFKQGKEI HGVLVRRLLS THPFLANSLL DLYTKGGMLD TASKIFNRIT QKDVASWNTM
ILGYGMLGQL DVAFELFDLM KDDGIDYDHV SYIAVLSACS HGGLVERGKK YFSQMLAQNM
KPQQMHYACM VDLLGRAGQL SESAEIIKNM PFRANSDVWG AMLGSCRIHG NIELARWAAE
HLFELKPEHS GYYTLLMNMY AEVGMWSEAN EIKTLMKSRK VQKNPAYSWV QNDNKLQAFL
VGNTYE
//
