ID K3ZFD1_SETIT Unreviewed; 1030 AA.
AC K3ZFD1;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=FYVE-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=101786292 {ECO:0000313|EnsemblPlants:KQL14516};
GN ORFNames=SETIT_3G160900v2 {ECO:0000313|EMBL:RCV16720.1};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL14516, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EMBL:RCV16720.1, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL14516,
RC ECO:0000313|Proteomes:UP000004995}, and Yugu1
RC {ECO:0000313|EMBL:RCV16720.1};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EMBL:RCV16720.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Yugu1 {ECO:0000313|EMBL:RCV16720.1};
RA Noorani M.;
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQL14516}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL14516};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; AGNK02001581; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM003530; RCV16720.1; -; Genomic_DNA.
DR EMBL; CM003530; RCV16721.1; -; Genomic_DNA.
DR EMBL; CM003530; RCV16722.1; -; Genomic_DNA.
DR RefSeq; XP_014660400.1; XM_014804914.1.
DR AlphaFoldDB; K3ZFD1; -.
DR STRING; 4555.K3ZFD1; -.
DR EnsemblPlants; KQL14516; KQL14516; SETIT_025281mg.
DR GeneID; 101786292; -.
DR Gramene; KQL14516; KQL14516; SETIT_025281mg.
DR KEGG; sita:101786292; -.
DR eggNOG; ENOG502QVGP; Eukaryota.
DR HOGENOM; CLU_005343_0_0_1; -.
DR InParanoid; K3ZFD1; -.
DR OMA; PMSMMKA; -.
DR OrthoDB; 551430at2759; -.
DR Proteomes; UP000004995; Chromosome III.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd00065; FYVE_like_SF; 1.
DR CDD; cd13365; PH_PLC_plant-like; 1.
DR Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR Gene3D; 2.130.10.30; Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR013591; Brevis_radix_dom.
DR InterPro; IPR027988; BRX_N.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR001849; PH_domain.
DR InterPro; IPR009091; RCC1/BLIP-II.
DR InterPro; IPR000408; Reg_chr_condens.
DR InterPro; IPR000306; Znf_FYVE.
DR InterPro; IPR017455; Znf_FYVE-rel.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR22870; REGULATOR OF CHROMOSOME CONDENSATION; 1.
DR PANTHER; PTHR22870:SF352; REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08381; BRX; 1.
DR Pfam; PF13713; BRX_N; 1.
DR Pfam; PF01363; FYVE; 1.
DR Pfam; PF16457; PH_12; 1.
DR Pfam; PF00415; RCC1; 6.
DR PRINTS; PR00633; RCCNDNSATION.
DR SMART; SM00064; FYVE; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF50729; PH domain-like; 1.
DR SUPFAM; SSF50985; RCC1/BLIP-II; 1.
DR PROSITE; PS51514; BRX; 1.
DR PROSITE; PS00626; RCC1_2; 1.
DR PROSITE; PS50012; RCC1_3; 6.
DR PROSITE; PS50178; ZF_FYVE; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00091}.
FT REPEAT 277..328
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 329..383
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 384..435
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 446..497
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 498..549
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 550..601
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT DOMAIN 606..668
FT /note="FYVE-type"
FT /evidence="ECO:0000259|PROSITE:PS50178"
FT DOMAIN 971..1026
FT /note="BRX"
FT /evidence="ECO:0000259|PROSITE:PS51514"
FT REGION 189..213
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 675..716
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 779..803
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 828..847
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 923..947
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 191..213
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 683..701
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 828..842
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1030 AA; 111695 MW; 694962D7BBCF0CDD CRC64;
MTPDDNALIT LKKGSKLIKY SRKGKPKIRE FRLSSDETTL VWYSHSKEKY LVLSSVSRII
PGQRTAVFRR FLHPEKDYLS FSLIYKKGQR SLDLVCKDQA EVEVWFSTLE TLITSTSGRK
SCSTDGPSDR LSVSDEVSHY QDNNFHDTTL DIASSITRTF NSGAYSATNS LSSAKADVGS
DRANMLRAST DGGRVSISSS VPSSSSQGSG QDDIESLGDV YVWGEVWTDV IPAEGSSNYL
CSKADILIPK PLESDVVLDV QQIACGSRHI ALTTRQGEVF AWGEELGGRL GHGTDADISR
PKLVEALAVS NVEYIACGEF HTCAVTSSGD LYTWGDGYYN AGLLGHGAGT SHWLPKQVSG
PLEGVQILSV ACGSWHSALT TSSGKVFTFG DGTFGALGHG NHESVAYPKE VETLSGFRTM
KVACGLWHSA AIVETSNQAG VNVVSRKLYT WGAGDKNLLG HGDKDARLVP TCVQSLIDYN
FHQVACGHSM TIALATSGHV FTMGSSSNGQ LGNPKSDGKQ PSLVQDRLAG ELVEEIACGS
CHVAVLTSRS EVYTWGMGAN GRLGHGGVED KKKPTLVEAL KDRHVKSIAC GSNFTTCICI
HKWVSGADQS VCSGCRQPFG FTRKRHNCYN CGLVHCHACS SRKVLKAALA PTPGKPHRVC
DSCFMKLKTA ETSSNSSYHK RNVNARRSVD SKDKSERPEI RPSRLATGSP AEPLKQAEIK
AVRNEIKPDP MSMMKAGQVP SMLPFNNLAF GGTFGPSLKP MAMAAAMPMA MPMSPSPLMK
KANPPAAAPL CGKSDTDNLK RTKDGLNEDI SKLQSQVNKL KQKCDAQEEQ LQKSERKTEN
SSSIAAEESS RCNSVLEFIR FLDNELKSIA DKVPGDTADS LKALQSQSER FLTGQGIHPL
EVTGASGRAH ATAHQRSASM GNLMLSQDGS SGTASSSATS LTSESPCHRI MENSTKANGD
FAPKLGTHGE VQLIEQFEPG VYVTLIQLRD GTKVFKRVRF SKRRFAEQQA EEWWRENQER
VFRKYNHPSN
//
