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Database: UniProt
Entry: K3ZRG4_SETIT
LinkDB: K3ZRG4_SETIT
Original site: K3ZRG4_SETIT 
ID   K3ZRG4_SETIT            Unreviewed;       638 AA.
AC   K3ZRG4;
DT   28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 1.
DT   27-MAR-2024, entry version 63.
DE   RecName: Full=RanBP2-type domain-containing protein {ECO:0000259|PROSITE:PS01358};
OS   Setaria italica (Foxtail millet) (Panicum italicum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX   NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL22544, ECO:0000313|Proteomes:UP000004995};
RN   [1] {ECO:0000313|EnsemblPlants:KQL22544, ECO:0000313|Proteomes:UP000004995}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL22544,
RC   ECO:0000313|Proteomes:UP000004995};
RX   PubMed=22580951; DOI=10.1038/nbt.2196;
RA   Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA   Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA   Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA   Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA   Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA   Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT   "Reference genome sequence of the model plant Setaria.";
RL   Nat. Biotechnol. 30:555-561(2012).
RN   [2] {ECO:0000313|EnsemblPlants:KQL22544}
RP   IDENTIFICATION.
RC   STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL22544};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR   EMBL; AGNK02000690; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; K3ZRG4; -.
DR   STRING; 4555.K3ZRG4; -.
DR   EnsemblPlants; KQL22544; KQL22544; SETIT_029194mg.
DR   Gramene; KQL22544; KQL22544; SETIT_029194mg.
DR   eggNOG; KOG1343; Eukaryota.
DR   InParanoid; K3ZRG4; -.
DR   OMA; ECCSTME; -.
DR   Proteomes; UP000004995; Chromosome II.
DR   ExpressionAtlas; K3ZRG4; baseline.
DR   GO; GO:0005730; C:nucleolus; IEA:EnsemblPlants.
DR   GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0009294; P:DNA-mediated transformation; IEA:EnsemblPlants.
DR   GO; GO:0009640; P:photomorphogenesis; IEA:EnsemblPlants.
DR   CDD; cd09992; HDAC_classII; 1.
DR   Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR   InterPro; IPR000286; His_deacetylse.
DR   InterPro; IPR023801; His_deacetylse_dom.
DR   InterPro; IPR037138; His_deacetylse_dom_sf.
DR   InterPro; IPR023696; Ureohydrolase_dom_sf.
DR   InterPro; IPR001876; Znf_RanBP2.
DR   PANTHER; PTHR10625:SF16; HISTONE DEACETYLASE 15; 1.
DR   PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR   Pfam; PF00850; Hist_deacetyl; 1.
DR   PRINTS; PR01270; HDASUPER.
DR   SUPFAM; SSF52768; Arginase/deacetylase; 1.
DR   PROSITE; PS01358; ZF_RANBP2_1; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000004995}.
FT   DOMAIN          157..176
FT                   /note="RanBP2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS01358"
FT   REGION          1..20
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   638 AA;  69117 MW;  A60F6183D10723CA CRC64;
     MASDMKPLSD QKDEIPSRSV ENCGVSKQAC HGKSQSCDSD VKPFCAEVIG ISSLIGSHTD
     GKASKENCGA CSFTYDHADA IVEDVKVAVA RSGHAESADH DGCQTAKNRS CMAVDDLPQE
     FEREQAGATL EELFFSNDEE EDDSDWDPSS SLVVNRWFCL NCTMPNVDEI TNCLNCHELK
     GSVVGGYDAF KTQIAQAALV SPDTELPPVS TAIGFDERML LHSELEIKPN PHPERPDRLR
     AIAASLAAAG IFPSKCALVP PREITKEELL MVHTPDHIES VEQTKNMLYS YFTSDTYANG
     HSACAAKLAA GLCADLASLI VSGRVHNGFA MVRPPGHHAG VKQAMGFCLH NNAAVAALAA
     KRAGAKKVLI VDWDVHHGNG TQEIFDGDSS VLYISLHRHE YGNFYPGTGA ADEVGILDGQ
     GFSVNIPWSR GGVGDNDYIF AFQTVVLPIA AEFAPDITII SAGFDAARGD PLGCCDVTPM
     GYSIMTSLLS DCSKGRLLVI LEGGYNLRSI SSSATEVVKV CRTVMLGWKQ ALHSGFHFET
     APSKEGLKTV LQVLKIQQQF WPVLGPTYAS LQEQQGSVFS KSTNKTNELR KRKHSGGSGP
     FWWKFGSKRL LYRVLYEGRY LRKIKVSGEG KTIDSAEP
//
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