ID K3ZRG4_SETIT Unreviewed; 638 AA.
AC K3ZRG4;
DT 28-NOV-2012, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2012, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=RanBP2-type domain-containing protein {ECO:0000259|PROSITE:PS01358};
OS Setaria italica (Foxtail millet) (Panicum italicum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
OX NCBI_TaxID=4555 {ECO:0000313|EnsemblPlants:KQL22544, ECO:0000313|Proteomes:UP000004995};
RN [1] {ECO:0000313|EnsemblPlants:KQL22544, ECO:0000313|Proteomes:UP000004995}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Yugu1 {ECO:0000313|EnsemblPlants:KQL22544,
RC ECO:0000313|Proteomes:UP000004995};
RX PubMed=22580951; DOI=10.1038/nbt.2196;
RA Bennetzen J.L., Schmutz J., Wang H., Percifield R., Hawkins J.,
RA Pontaroli A.C., Estep M., Feng L., Vaughn J.N., Grimwood J., Jenkins J.,
RA Barry K., Lindquist E., Hellsten U., Deshpande S., Wang X., Wu X.,
RA Mitros T., Triplett J., Yang X., Ye C.Y., Mauro-Herrera M., Wang L., Li P.,
RA Sharma M., Sharma R., Ronald P.C., Panaud O., Kellogg E.A., Brutnell T.P.,
RA Doust A.N., Tuskan G.A., Rokhsar D., Devos K.M.;
RT "Reference genome sequence of the model plant Setaria.";
RL Nat. Biotechnol. 30:555-561(2012).
RN [2] {ECO:0000313|EnsemblPlants:KQL22544}
RP IDENTIFICATION.
RC STRAIN=Yugu1 {ECO:0000313|EnsemblPlants:KQL22544};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR EMBL; AGNK02000690; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; K3ZRG4; -.
DR STRING; 4555.K3ZRG4; -.
DR EnsemblPlants; KQL22544; KQL22544; SETIT_029194mg.
DR Gramene; KQL22544; KQL22544; SETIT_029194mg.
DR eggNOG; KOG1343; Eukaryota.
DR InParanoid; K3ZRG4; -.
DR OMA; ECCSTME; -.
DR Proteomes; UP000004995; Chromosome II.
DR ExpressionAtlas; K3ZRG4; baseline.
DR GO; GO:0005730; C:nucleolus; IEA:EnsemblPlants.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0009294; P:DNA-mediated transformation; IEA:EnsemblPlants.
DR GO; GO:0009640; P:photomorphogenesis; IEA:EnsemblPlants.
DR CDD; cd09992; HDAC_classII; 1.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR InterPro; IPR001876; Znf_RanBP2.
DR PANTHER; PTHR10625:SF16; HISTONE DEACETYLASE 15; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000004995}.
FT DOMAIN 157..176
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS01358"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 638 AA; 69117 MW; A60F6183D10723CA CRC64;
MASDMKPLSD QKDEIPSRSV ENCGVSKQAC HGKSQSCDSD VKPFCAEVIG ISSLIGSHTD
GKASKENCGA CSFTYDHADA IVEDVKVAVA RSGHAESADH DGCQTAKNRS CMAVDDLPQE
FEREQAGATL EELFFSNDEE EDDSDWDPSS SLVVNRWFCL NCTMPNVDEI TNCLNCHELK
GSVVGGYDAF KTQIAQAALV SPDTELPPVS TAIGFDERML LHSELEIKPN PHPERPDRLR
AIAASLAAAG IFPSKCALVP PREITKEELL MVHTPDHIES VEQTKNMLYS YFTSDTYANG
HSACAAKLAA GLCADLASLI VSGRVHNGFA MVRPPGHHAG VKQAMGFCLH NNAAVAALAA
KRAGAKKVLI VDWDVHHGNG TQEIFDGDSS VLYISLHRHE YGNFYPGTGA ADEVGILDGQ
GFSVNIPWSR GGVGDNDYIF AFQTVVLPIA AEFAPDITII SAGFDAARGD PLGCCDVTPM
GYSIMTSLLS DCSKGRLLVI LEGGYNLRSI SSSATEVVKV CRTVMLGWKQ ALHSGFHFET
APSKEGLKTV LQVLKIQQQF WPVLGPTYAS LQEQQGSVFS KSTNKTNELR KRKHSGGSGP
FWWKFGSKRL LYRVLYEGRY LRKIKVSGEG KTIDSAEP
//