ID K4FWF5_ARAHA Unreviewed; 1273 AA.
AC K4FWF5;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFJ66169.1};
GN ORFNames=11M19.13 {ECO:0000313|EMBL:AFJ66169.1};
OS Arabidopsis halleri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81970 {ECO:0000313|EMBL:AFJ66169.1};
RN [1] {ECO:0000313|EMBL:AFJ66169.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22865739; DOI=10.1534/genetics.112.143958;
RA Guo Y.L., Todesco M., Hagmann J., Das S., Weigel D.;
RT "Independent FLC Mutations as Causes of Flowering-Time Variation in
RT Arabidopsis thaliana and Capsella rubella.";
RL Genetics 192:729-739(2012).
RN [2] {ECO:0000313|EMBL:AFJ66169.1}
RP NUCLEOTIDE SEQUENCE.
RA Savar N.S., Jahanian-Najafabadi A., Bouzari S.;
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; JX003246; AFJ66169.1; -; Genomic_DNA.
DR AlphaFoldDB; K4FWF5; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR013103; RVT_2.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR42648:SF11; TRANSPOSON TY4-P GAG-POL POLYPROTEIN; 1.
DR Pfam; PF14223; Retrotran_gag_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF07727; RVT_2; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 262..277
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 400..546
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 215..253
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 605..660
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 237..251
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 607..641
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 642..657
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1273 AA; 145470 MW; 5895BC31D28E2DD5 CRC64;
MADDRTTRPK EISPPSIQCP MLNDSNYTVW AMQMRIMLKI YHVYDTIEPG SEDVDKNNIA
TGLLFQAMPE ALILQVGDQE TPKAVWDAIK SRHQGADRVK EARLQTLMSE FERIRMKDTY
TIDSFSGKLS EIASKSSSLG GKIEETKLVK KFLNSLPRGR FIQIIASLEQ VLDLNKTGFE
DIVGRLKAYE ERILDEEAGG ESQGKLLYAN TYQQNFNNSR GRGRGRGYRG RGRGRFNSQE
RTTNQNNQGQ AKEKKDISKV VCYRCDKPGH YASSCPERAQ RTHEANKTET EEADAALYMH
EVVFLNEEKV IPRNYEIKDG EDKVWYLDNG ASNHMTGNKT FFSELNEKIK GKVKFGDGSC
IDIGGKGSIL FQSKTEEQRL VKDIYYIPEL KSNILSLGQA TEAGCDLLNA DLCGPISPST
IANNKYFFVI IDDFSRYMWT ILMKEKGEAF GKLKAFRQLV EKEFEKEIIT LRTDRGGEFM
SREFNDFCEE NRIKRHLTAP YTPQQNGVVE RRNRTLMEMT RSILKAKKSL VHLGIEPGTK
AYRLYNLTTR KVVVSRDVIF DEKKSWSWNE TRDGTSKYPG LFHMRWGEVI DVGEGPVVVN
QQEDHDEIGS NNGESDHDQE NNNNTDEDSH DHEDTDHSET HQQELPQVPQ AQELRRSGRQ
TALPRHLEDY VLQAKIEVER LLLSINDETR SYKEAKGLLK WRKASKEEPR EAKVIGLKWI
IKIKKNADGT INKYKARLVA KGYVQESGID FEEVFVPVAR LETIQLLIAL AASHGWEIHH
LDVKTAFLHG ELKEDVYVDQ PEGFEVKGEE HKVYKLSKAL YGLKQAPRAW NTNLDQILKE
FKFKKCSTEN SVYRKEEEGT LLIVAVYVDD LFVMGDTLKV ICEFKKDMSS KFEMSDLGKL
TYYLGMEVRQ GEEGIEIKQE AYARKILLEA GIEPCNPTKI PMMFGLQVSK AQEEPEIDPT
SYRRNIGCLR YLLHTRPDLA FAVGVASRYM QSPRKSHGEI MKQILRYLKG TMTFGLRFSR
EASKSIKYTD NSHNIDQDNG RSTTCHIFYF RSSPISWCSQ KQGTVALSSC EAEFMAATEA
ARQAIWLQEI LSEIMGWKTE KILIKIDNKS AIALTKNPVF HGKSKHIYKR YHFIRECIKN
EVVDVEHVPG EEQKADILTK ALARVKFGVM RSMIGVQDLS SIELKLKMEI VGVSFYRTED
SRSNGGNASC RESESPRSVD FVAPDIGDKQ DVYFADQVIW TVKVHYDVKP VKPKPKNILD
LYITSYTAIS LCI
//
