ID K4G4R8_CALMI Unreviewed; 313 AA.
AC K4G4R8;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE RecName: Full=60S acidic ribosomal protein P0 {ECO:0000256|PIRNR:PIRNR039087};
GN Name=rplp0 {ECO:0000313|Ensembl:ENSCMIP00000029362.1};
OS Callorhinchus milii (Ghost shark).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus.
OX NCBI_TaxID=7868 {ECO:0000313|EMBL:AFM85950.1};
RN [1] {ECO:0000313|Proteomes:UP000314986}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=17185593; DOI=10.1126/science.1130708;
RA Venkatesh B., Kirkness E.F., Loh Y.H., Halpern A.L., Lee A.P., Johnson J.,
RA Dandona N., Viswanathan L.D., Tay A., Venter J.C., Strausberg R.L.,
RA Brenner S.;
RT "Ancient noncoding elements conserved in the human genome.";
RL Science 314:1892-1892(2006).
RN [2] {ECO:0000313|Proteomes:UP000314986}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=17407382;
RA Venkatesh B., Kirkness E.F., Loh Y.H., Halpern A.L., Lee A.P., Johnson J.,
RA Dandona N., Viswanathan L.D., Tay A., Venter J.C., Strausberg R.L.,
RA Brenner S.;
RT "Survey sequencing and comparative analysis of the elephant shark
RT (Callorhinchus milii) genome.";
RL PLoS Biol. 5:E101-E101(2007).
RN [3] {ECO:0000313|EMBL:AFM85950.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Gills {ECO:0000313|EMBL:AFM85775.1}, Intestine
RC {ECO:0000313|EMBL:AFM85950.1}, Kidney {ECO:0000313|EMBL:AFM87413.1},
RC Liver {ECO:0000313|EMBL:AFM89994.1}, Spleen
RC {ECO:0000313|EMBL:AFM88431.1}, and Testis
RC {ECO:0000313|EMBL:AFM90619.1};
RX PubMed=23056606;
RA Tan Y.Y., Kodzius R., Tay B.H., Tay A., Brenner S., Venkatesh B.;
RT "Sequencing and Analysis of Full-Length cDNAs, 5'-ESTs and 3'-ESTs from a
RT Cartilaginous Fish, the Elephant Shark (Callorhinchus milii).";
RL PLoS ONE 7:E47174-E47174(2012).
RN [4] {ECO:0000313|EMBL:AFP05449.1, ECO:0000313|Proteomes:UP000314986}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Ovary {ECO:0000313|EMBL:AFP05449.1};
RX PubMed=24402279; DOI=10.1038/nature12826;
RG International Elephant Shark Genome Sequencing Consortium;
RA Venkatesh B., Lee A.P., Ravi V., Maurya A.K., Lian M.M., Swann J.B.,
RA Ohta Y., Flajnik M.F., Sutoh Y., Kasahara M., Hoon S., Gangu V., Roy S.W.,
RA Irimia M., Korzh V., Kondrychyn I., Lim Z.W., Tay B.H., Tohari S.,
RA Kong K.W., Ho S., Lorente-Galdos B., Quilez J., Marques-Bonet T.,
RA Raney B.J., Ingham P.W., Tay A., Hillier L.W., Minx P., Boehm T.,
RA Wilson R.K., Brenner S., Warren W.C.;
RT "Elephant shark genome provides unique insights into gnathostome
RT evolution.";
RL Nature 505:174-179(2014).
RN [5] {ECO:0000313|Ensembl:ENSCMIP00000029362.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- FUNCTION: Ribosomal protein P0 is the functional equivalent of E.coli
CC protein L10. {ECO:0000256|ARBA:ARBA00002200,
CC ECO:0000256|PIRNR:PIRNR039087}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL10 family.
CC {ECO:0000256|ARBA:ARBA00008889, ECO:0000256|PIRNR:PIRNR039087}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JX207461; AFM85775.1; -; mRNA.
DR EMBL; JX207609; AFM85923.1; -; mRNA.
DR EMBL; JX207636; AFM85950.1; -; mRNA.
DR EMBL; JX208262; AFM86576.1; -; mRNA.
DR EMBL; JX208639; AFM86953.1; -; mRNA.
DR EMBL; JX209099; AFM87413.1; -; mRNA.
DR EMBL; JX210117; AFM88431.1; -; mRNA.
DR EMBL; JX210335; AFM88649.1; -; mRNA.
DR EMBL; JX210605; AFM88919.1; -; mRNA.
DR EMBL; JX211680; AFM89994.1; -; mRNA.
DR EMBL; JX211799; AFM90113.1; -; mRNA.
DR EMBL; JX212305; AFM90619.1; -; mRNA.
DR EMBL; JX212449; AFM90763.1; -; mRNA.
DR EMBL; JW872931; AFP05449.1; -; mRNA.
DR STRING; 7868.ENSCMIP00000029362; -.
DR Ensembl; ENSCMIT00000029828.1; ENSCMIP00000029362.1; ENSCMIG00000012693.1.
DR GeneTree; ENSGT00390000017839; -.
DR Proteomes; UP000314986; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0042254; P:ribosome biogenesis; IEA:InterPro.
DR CDD; cd05795; Ribosomal_P0_L10e; 1.
DR Gene3D; 3.30.70.1730; -; 1.
DR Gene3D; 3.90.105.20; -; 1.
DR InterPro; IPR001790; Ribosomal_uL10.
DR InterPro; IPR040637; Ribosomal_uL10-like_insert.
DR InterPro; IPR043164; Ribosomal_uL10-like_insert_sf.
DR InterPro; IPR043141; Ribosomal_uL10-like_sf.
DR InterPro; IPR030670; uL10_eukaryotes.
DR PANTHER; PTHR45699; 60S ACIDIC RIBOSOMAL PROTEIN P0; 1.
DR PANTHER; PTHR45699:SF3; 60S ACIDIC RIBOSOMAL PROTEIN P0; 1.
DR Pfam; PF00428; Ribosomal_60s; 1.
DR Pfam; PF00466; Ribosomal_L10; 1.
DR Pfam; PF17777; RL10P_insert; 1.
DR PIRSF; PIRSF039087; L10E; 1.
DR SUPFAM; SSF160369; Ribosomal protein L10-like; 1.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000314986};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|PIRNR:PIRNR039087};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000256|PIRNR:PIRNR039087}.
FT DOMAIN 111..180
FT /note="Large ribosomal subunit protein uL10-like insertion"
FT /evidence="ECO:0000259|Pfam:PF17777"
FT REGION 285..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 313 AA; 34338 MW; 05B914197EC78A99 CRC64;
MPREDRATWK SNYFLKIIQL LDEFPKCFIV GADNVGSKQM QHIRISLRSK AVVLMGKNTM
MRKAIRGHIE NNPALEKLLP HIRGNVGFVF TKEDLCEIRD MLLSNKVPAC ARAGALAPCD
VTVPAQNTGL GPEKTSFFQA LGITTKISRG TIEILSDVPL IKVGDKVGAS EATLLNMLNI
SPFSYGLMIM QVYDNGSVYN PEVLDITEEA LQQRFLEGVR NVASVCLQIG YPTIASIPHS
VINGYRRVLA VAVETDYVFP LAEKVKAFLA DPSAFAAPVA DAAPAAAKVE EKKEEKKEES
EESDDDMGFG LFD
//
