ID K4KMT5_SIMAS Unreviewed; 330 AA.
AC K4KMT5;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AFV00485.1};
GN OrderedLocusNames=M5M_16770 {ECO:0000313|EMBL:AFV00485.1};
OS Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales;
OC Cellvibrionaceae; Simiduia.
OX NCBI_TaxID=1117647 {ECO:0000313|EMBL:AFV00485.1, ECO:0000313|Proteomes:UP000000466};
RN [1] {ECO:0000313|EMBL:AFV00485.1, ECO:0000313|Proteomes:UP000000466}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 21679 / JCM 13881 / BCRC 17597 / SA1
RC {ECO:0000313|Proteomes:UP000000466};
RX PubMed=23405302; DOI=10.1128/genomeA.00039-12;
RA Lin S.Y., Shieh W.Y., Chen J.S., Tang S.L.;
RT "Complete genome sequence of Simiduia agarivorans SA1(T), a marine
RT bacterium able to degrade a variety of polysaccharides.";
RL Genome Announc. 1:E00039-E00039(2013).
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DR EMBL; CP003746; AFV00485.1; -; Genomic_DNA.
DR RefSeq; WP_015048637.1; NZ_ATUQ01000001.1.
DR AlphaFoldDB; K4KMT5; -.
DR STRING; 1117647.M5M_16770; -.
DR KEGG; saga:M5M_16770; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_6_1_6; -.
DR OrthoDB; 5718990at2; -.
DR Proteomes; UP000000466; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06284; PBP1_LacI-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF121; HTH-TYPE TRANSCRIPTIONAL REPRESSOR CYTR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000000466};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..56
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 330 AA; 36013 MW; 4D321BDF51D5204F CRC64;
MSSIREVARI AGVSIATVSR ALSTPDKVSK AALEKVQAAI AKVNYRPNMM ARNFRAVRSY
SIVVLVPNIA NLFFSTVIRG IEDAAQQAGY AVLLGDTRDS VKREKDYVNL VETRQSDGVL
QLRPHIPGVS LEPNPHIPMV NACGCENTPY ASVRIDNAGA AQAVMEYLIG QGHTRIGVIA
GKADNPHTID RYKGYMQALE AAGIPFDKNL VVYGDFTLRS GVVAASHFAR MKERPSAIFS
MNDEMAIGAI QGLRTAGIRV PEDMSITGFD DIEFARYSDP ALTTVAQPAE ELGKTAFQSL
LTLIEGRELQ NSEIVLPYEF VVRKSTPNRR
//
