ID K7GK36_PELSI Unreviewed; 457 AA.
AC K7GK36;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=TRAF interacting protein {ECO:0000313|Ensembl:ENSPSIP00000020647.1};
GN Name=TRAIP {ECO:0000313|Ensembl:ENSPSIP00000020647.1};
OS Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia;
OC Trionychidae; Pelodiscus.
OX NCBI_TaxID=13735 {ECO:0000313|Ensembl:ENSPSIP00000020647.1, ECO:0000313|Proteomes:UP000007267};
RN [1] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RG Soft-shell Turtle Genome Consortium;
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000007267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
RX PubMed=23624526; DOI=10.1038/ng.2615;
RA Wang Z., Pascual-Anaya J., Zadissa A., Li W., Niimura Y., Huang Z., Li C.,
RA White S., Xiong Z., Fang D., Wang B., Ming Y., Chen Y., Zheng Y.,
RA Kuraku S., Pignatelli M., Herrero J., Beal K., Nozawa M., Li Q., Wang J.,
RA Zhang H., Yu L., Shigenobu S., Wang J., Liu J., Flicek P., Searle S.,
RA Wang J., Kuratani S., Yin Y., Aken B., Zhang G., Irie N.;
RT "The draft genomes of soft-shell turtle and green sea turtle yield insights
RT into the development and evolution of the turtle-specific body plan.";
RL Nat. Genet. 45:701-706(2013).
RN [3] {ECO:0000313|Ensembl:ENSPSIP00000020647.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AGCU01162626; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01162627; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01162628; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGCU01162629; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_014434741.1; XM_014579255.1.
DR AlphaFoldDB; K7GK36; -.
DR STRING; 13735.ENSPSIP00000020647; -.
DR Ensembl; ENSPSIT00000020744.1; ENSPSIP00000020647.1; ENSPSIG00000018264.1.
DR GeneID; 102460716; -.
DR KEGG; pss:102460716; -.
DR CTD; 10293; -.
DR eggNOG; KOG0827; Eukaryota.
DR GeneTree; ENSGT00390000007696; -.
DR HOGENOM; CLU_046426_0_0_1; -.
DR OMA; DECFQLR; -.
DR OrthoDB; 3107552at2759; -.
DR TreeFam; TF317309; -.
DR Proteomes; UP000007267; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:Ensembl.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0090734; C:site of DNA damage; IEA:Ensembl.
DR GO; GO:0042802; F:identical protein binding; IEA:Ensembl.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:Ensembl.
DR GO; GO:0006974; P:DNA damage response; IEA:Ensembl.
DR GO; GO:0010804; P:negative regulation of tumor necrosis factor-mediated signaling pathway; IEA:Ensembl.
DR GO; GO:0016567; P:protein ubiquitination; IEA:Ensembl.
DR GO; GO:0031297; P:replication fork processing; IEA:Ensembl.
DR CDD; cd16480; RING-H2_TRAIP; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46569:SF1; E3 UBIQUITIN-PROTEIN LIGASE RFWD3-RELATED; 1.
DR PANTHER; PTHR46569; E3 UBIQUITIN-PROTEIN LIGASE TRAIP; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF46579; Prefoldin; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000007267};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 7..50
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 323..354
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 401..421
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 69..96
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 135..169
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 201..270
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 323..346
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 457 AA; 51430 MW; 1BFB0FB4D5C46E60 CRC64;
MPIRAHCTIC SDFFDNQRDV AAIHCGHTFH QQCLIQWFDT APSRTCPQCR IQVSKRHIIN
RLFFDVALEE QTSVDAESLQ NELDRVKAQL SAKDKEKRDC QSIIDALRET VDLRNATVES
LQKALGETEM LCSTLKKQMK YLEQQQEDAK GAKEEARRLR NKLKTMERVE LLLQSQRPEV
EEMIRDMGTG PAAVDQLAVY CVSLKREYEN LKEARKASSE VTEKLKKELF SANHTLQKTL
LELEKMKEEL KSTQKDLSTA DKEILSLKKK IGILQETLKV PSATSETLSR LVFESPAPME
LLSPKLHRPA HSDKIDLDAT FDVETPEHAP RKPVLAPAKR PKLDRKLPPA PSLAQSVLKE
SVENWASEPE DDPREELFPA FIRNSVLSRK LPMGSLMGPR TNTGTLPSDK APGAAAPGCK
EEEEDCLPAR VRNCSSCLLG QRPGEIGQLP PVTRRPA
//
