ID K7LMV4_SOYBN Unreviewed; 646 AA.
AC K7LMV4;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=DNA mismatch repair proteins mutS family domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100815919 {ECO:0000313|EnsemblPlants:KRH28136};
GN ORFNames=GLYMA_11G034600 {ECO:0000313|EMBL:KRH28137.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH28137.1};
RN [1] {ECO:0000313|EMBL:KRH28137.1, ECO:0000313|EnsemblPlants:KRH28136}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH28136};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH28137.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH28136}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH28136};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH28137.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH28137.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DNA mismatch repair MutS family.
CC {ECO:0000256|ARBA:ARBA00006271}.
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DR EMBL; CM000844; KRH28136.1; -; Genomic_DNA.
DR EMBL; CM000844; KRH28137.1; -; Genomic_DNA.
DR AlphaFoldDB; K7LMV4; -.
DR EnsemblPlants; KRH28136; KRH28136; GLYMA_11G034600.
DR EnsemblPlants; KRH28137; KRH28137; GLYMA_11G034600.
DR Gramene; KRH28136; KRH28136; GLYMA_11G034600.
DR Gramene; KRH28137; KRH28137; GLYMA_11G034600.
DR Proteomes; UP000008827; Chromosome 11.
DR ExpressionAtlas; K7LMV4; baseline and differential.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0030983; F:mismatched DNA binding; IEA:InterPro.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0006298; P:mismatch repair; IEA:InterPro.
DR Gene3D; 1.10.1420.10; -; 2.
DR Gene3D; 3.30.420.110; MutS, connector domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR011184; DNA_mismatch_repair_Msh2.
DR InterPro; IPR000432; DNA_mismatch_repair_MutS_C.
DR InterPro; IPR007861; DNA_mismatch_repair_MutS_clamp.
DR InterPro; IPR007696; DNA_mismatch_repair_MutS_core.
DR InterPro; IPR036187; DNA_mismatch_repair_MutS_sf.
DR InterPro; IPR036678; MutS_con_dom_sf.
DR InterPro; IPR045076; MutS_family.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11361; DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER; 1.
DR PANTHER; PTHR11361:SF21; MUTS PROTEIN HOMOLOG 4; 1.
DR Pfam; PF05192; MutS_III; 1.
DR Pfam; PF05190; MutS_IV; 1.
DR Pfam; PF00488; MutS_V; 1.
DR PIRSF; PIRSF005813; MSH2; 2.
DR SMART; SM00534; MUTSac; 1.
DR SMART; SM00533; MUTSd; 1.
DR SUPFAM; SSF48334; DNA repair protein MutS, domain III; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 157..495
FT /note="DNA mismatch repair protein MutS core"
FT /evidence="ECO:0000259|SMART:SM00533"
FT DOMAIN 510..645
FT /note="DNA mismatch repair proteins mutS family"
FT /evidence="ECO:0000259|SMART:SM00534"
SQ SEQUENCE 646 AA; 72007 MW; 7EAD8A4A2AD873EB CRC64;
MEDDGGESSS FVVGIIENRA KEVGLAAFDL RSASLHLSQY IETSSSYQNT KTLLHFYDPI
VIIIPPNKLA SNSTAGVTEL VDRFYGSVKQ VMLARGCFDD TKGAILIKNL AAKEPSALGL
DTYYKQYYLC LAAAAATLKW TEAEKGVVVT NHSLSVTFNG SFDHMNIDST RSRLLRANLL
QPLKDIETIN ARLDCLDELM SNEQLFFGLC QILRKFPKET DRVLCHFCFK AKKVTAEALA
VDRAKKSQVL VSSVILLKTA LDALPLLSKV LKDVKSSLLS NIYKSVCENE KYDLIRKRIG
EVIDEDVLHA RVPFVACTQQ CFAVKAGIDG LLDISRRAFC ETSEAIHNLA NNYREDFKLP
NLKLTYKNRQ GFHFVIPQKN IQGKLPSKFI QVVKHGNNIR CSSLELASLN ARNKSAAAEC
YTRTEVCLEE LMDDIRENVS VLTLLAEVLC LLDMIVNSFA HMISTKPVDR YTRPEFTENG
PLAIDSGRHP ILESIHNDFV ANNIFLTEAS NMAIVMGPNM SGKSTYLQQV CLIVILAQVG
CYVPARFSTV RVVDRMFTRM GAVDNLESNS STFMTEMKET AFIMQNVSQR SLIVMDELGR
ATSSSDGFAI AWSCCEHLLS LKTKTDSFHQ PSKEHIVVID PRISLP
//
