ID K7LSN9_SOYBN Unreviewed; 903 AA.
AC K7LSN9;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100797093 {ECO:0000313|EnsemblPlants:KRH24158};
GN ORFNames=GLYMA_12G024900 {ECO:0000313|EMBL:KRH24157.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH24158};
RN [1] {ECO:0000313|EMBL:KRH24157.1, ECO:0000313|EnsemblPlants:KRH24158}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH24158};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH24157.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH24158}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH24158};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH24157.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH24157.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000845; KRH24157.1; -; Genomic_DNA.
DR EMBL; CM000845; KRH24158.1; -; Genomic_DNA.
DR RefSeq; XP_006592041.1; XM_006591978.2.
DR RefSeq; XP_006592042.1; XM_006591979.2.
DR AlphaFoldDB; K7LSN9; -.
DR SMR; K7LSN9; -.
DR PaxDb; 3847-GLYMA12G02811-2; -.
DR EnsemblPlants; KRH24157; KRH24157; GLYMA_12G024900.
DR EnsemblPlants; KRH24158; KRH24158; GLYMA_12G024900.
DR GeneID; 100797093; -.
DR Gramene; KRH24157; KRH24157; GLYMA_12G024900.
DR Gramene; KRH24158; KRH24158; GLYMA_12G024900.
DR KEGG; gmx:100797093; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_10_1; -.
DR InParanoid; K7LSN9; -.
DR OMA; VCHAVLI; -.
DR OrthoDB; 447041at2759; -.
DR Proteomes; UP000008827; Chromosome 12.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF361; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 7.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 16.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 189..223
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 259..293
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 294..328
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 364..398
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 399..433
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 434..468
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 469..503
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 504..538
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 539..573
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 574..608
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 609..643
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 679..713
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 714..748
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 783..817
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 818..852
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 853..887
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 903 AA; 101223 MW; 3E57027C33E69ACB CRC64;
MKLRLVCTAV PAAAATTTTA PSLHRHFSAS KPDEENDCRF VSLLCDIVRG KQSWKVAFND
ASISSTLRPH HVEQVLMNTL DDAKLALRFF NFLGLHKNMN HSTTSYAIMV HALVHSRLFW
PANSLLHTLL LRESHPKCVF SHFLDSYKRC KFSSTLGFNL LVQNYVLSSR IFDAVVIVKL
MFANNLLPEV RTLSALLNGL LKVRKFITVW ELFDESVNAG VRPDPYTCSA VVRSMCELKD
FLRAKEKIRW MEANGFDLSI VTYNVLIHGL CKGDRVSEAV EVKRSLGGKG LAADVVTYCT
LVLGFCRLQQ FEAGIQLMDE MVELGFSPTE AAVSGLVDGL RKQGKIDDAY ELVVKVGRFG
FVPNLFVYNA LINSLCKGGD LDKAELLYSN MSLMNLRPNG ITYSILIDSF CRSGRLDVAI
SYFDRMIQDG IGETVYAYNS LINGQCKFGD LSAAESLFIE MTNKGVEPTA TTFTSLISGY
CKDLQVQKAF KLYNKMIDNG ITPNVYTFTA LISGLCSTNK MAEASELFDE LVERKIKPTE
VTYNVLIEGY CRDGKIDKAF ELLEDMHQKG LVPDTYTYRP LISGLCSTGR VSKAKDFIDD
LHKQNVKLNE MCYSALLHGY CQEGRLMEAL SASCEMIQRG INMDLVCHAV LIDGALKQPD
RKTFFDLLKD MHDQGLRPDN VIYTSMIDTY SKEGSFKKAF ECWDLMVTEE CFPNVVTYTA
LMNGLCKAGE MDRAGLLFKR MQAANVPPNS ITYGCFLDNL TKEGNMKEAI GLHHAMLKGL
LANTVTHNII IRGFCKLGRF HEATKVLSEM TENGIFPDCV TYSTLIYEYC RSGNVGASVK
LWDTMLNRGL EPDLVAYNLL IYGCCVNGEL DKAFELRDDM LRRGVKPRQN LHAFLKGKYK
STI
//
