ID K7M0T4_SOYBN Unreviewed; 953 AA.
AC K7M0T4;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=Helicase ATP-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100795356 {ECO:0000313|EnsemblPlants:KRH20806};
GN ORFNames=GLYMA_13G201800 {ECO:0000313|EMBL:KRH20806.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH20806.1};
RN [1] {ECO:0000313|EMBL:KRH20806.1, ECO:0000313|EnsemblPlants:KRH20806}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH20806};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH20806.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH20806}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH20806};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH20806.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH20806.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000846; KRH20806.1; -; Genomic_DNA.
DR RefSeq; XP_006594408.1; XM_006594345.2.
DR AlphaFoldDB; K7M0T4; -.
DR SMR; K7M0T4; -.
DR STRING; 3847.K7M0T4; -.
DR PaxDb; 3847-GLYMA13G27170-2; -.
DR EnsemblPlants; KRH20806; KRH20806; GLYMA_13G201800.
DR GeneID; 100795356; -.
DR Gramene; KRH20806; KRH20806; GLYMA_13G201800.
DR KEGG; gmx:100795356; -.
DR eggNOG; KOG0390; Eukaryota.
DR InParanoid; K7M0T4; -.
DR OrthoDB; 391749at2759; -.
DR Proteomes; UP000008827; Chromosome 13.
DR ExpressionAtlas; K7M0T4; baseline.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR044567; CLSY/DRD1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45821:SF1; ATP-DEPENDENT HELICASE FAMILY PROTEIN-RELATED; 1.
DR PANTHER; PTHR45821; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 437..616
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 763..931
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 156..218
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..31
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 953 AA; 108037 MW; 4948AE90CD21110E CRC64;
MESSVDALAS KRSRSSGFSP DPDRGKRQKL SNVVEHGNPF AVTDVLDRIE HGKYGSVTKD
IEALFARRMK VLGPYLAKYP KLNQLIHAVI DRDEEILKSE DQQVTGLTHQ NVIDLETPKL
EVQQITGLTL QNVIDLEGEN TEKDVHAAQI HGLIHIDSDE EDDGDKKSIV PYEASDEEDG
RDKKIIVPYE ASDEEDGRDK KIIVPYEASD EEDGRDKKII VPYEASNEED DRDKKSFVAF
HEVVSPRLVA PSPASKTVEY HTPIPYHGET EDLKIETSIS GKDNTRGDKG VYIGVQEVED
HQGDTADDDG LEDIWKEMSM AIECSKDTYV NPLPDEEVKE DEDCDHSFIL KDDLGYVCRV
CGIIDRGIET IFEFQYKAKR STRTYASDSR NTKGKADAFG INVAEDDLIV TEISAHPRHM
KQMKPHQVEG FNFLARNLVG DDPGGCILAH APGSGKTFMI ISFMQSFLGK YPNARPLVVL
PKGILSTWKK EFQTWQVEDI PLYDFYTVKA DSRSQQLEVL KQWVEHKSIL FLGYKQFSSV
VCDNGASSES LSCKKILLNV PSILILDEGH NPRNENTDMV QSLVEVHTRL KVVLSGTLYQ
NHVKEVFNIL NLVRPKFLKM ETSKPIVRRI RSRVHTPGVR SFYDLVENTL EKDTHFKTKV
AVIQDLREMT SKVLHYYKGD FLDELPGLVD FTVVLNLSPR QKPEVEKLKR LSGNFKKSSV
GSAVYLHPKL KPLAEKSEKG ISDNMIDALI EKLDVRDGVK SKFFLNMLNL CESAGEKLLV
FSQYLLPLKY LERLTMKWKG WSLKREIFVI SGETSSEDRE WSMERFNNSP DSKVFFGSIK
ACGEGISLVG ASRIIILDVH LNPSVTRQAI GRAFRPGQKK KVFVYRLVSA DSPEEEDHST
CFKKELISKM WFEWNEYCGD QAFEVEEVGV KECDDLFLES PLLGEDVKAL YKR
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