ID K9ZWE2_9STRA Unreviewed; 167 AA.
AC K9ZWE2;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=Photosystem I assembly protein Ycf3 {ECO:0000256|HAMAP-Rule:MF_00439};
GN Name=ycf3 {ECO:0000256|HAMAP-Rule:MF_00439,
GN ECO:0000313|EMBL:AFZ64265.1};
GN ORFNames=Naga00036 {ECO:0000313|EMBL:AHX25084.1}, Naga_1Chloroplast54
GN {ECO:0000313|EMBL:AFZ64265.1};
OS Nannochloropsis gaditana.
OG Plastid; Chloroplast {ECO:0000313|EMBL:AFZ64265.1}.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae;
OC Eustigmatales; Monodopsidaceae; Nannochloropsis.
OX NCBI_TaxID=72520 {ECO:0000313|EMBL:AFZ64265.1, ECO:0000313|Proteomes:UP000019335};
RN [1] {ECO:0000313|EMBL:AFZ64265.1, ECO:0000313|Proteomes:UP000019335}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=3B {ECO:0000313|EMBL:AFZ64265.1}, and B-31
RC {ECO:0000313|Proteomes:UP000019335};
RA Corteggiani Carpinelli E., Telatin A., Vitulo N., D'Angelo M., Forcato C.,
RA Vezzi A., Valle G.;
RT "Genome sequencing and transcriptome profiling of the oil producing
RT microalga Nannochloropsis gaditana.";
RL Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AGI98688.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP527 {ECO:0000313|EMBL:AGI98688.1};
RX PubMed=23915326; DOI=10.1186/1471-2164-14-534;
RA Wei L., Xin Y., Wang D., Jing X., Zhou Q., Su X., Jia J., Ning K., Chen F.,
RA Hu Q., Xu J.;
RT "Nannochloropsis plastid and mitochondrial phylogenomes reveal organelle
RT diversification mechanism and intragenus phylotyping strategy in
RT microalgae.";
RL BMC Genomics 14:534-534(2013).
RN [3] {ECO:0000313|EMBL:AHX25084.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP526 {ECO:0000313|EMBL:AHX25084.1};
RX PubMed=24646409; DOI=10.1186/1471-2164-15-212;
RA Starkenburg S.R., Kwon K.J., Jha R.K., McKay C., Jacobs M., Chertkov O.,
RA Twary S., Rocap G., Cattolico R.A.;
RT "A pangenomic analysis of the Nannochloropsis organellar genomes reveals
RT novel genetic variations in key metabolic genes.";
RL BMC Genomics 15:212-212(2014).
CC -!- FUNCTION: Seems to be required for the assembly of the photosystem I
CC complex. {ECO:0000256|HAMAP-Rule:MF_00439}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004170};
CC Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004170}. Plastid,
CC chloroplast thylakoid membrane {ECO:0000256|HAMAP-Rule:MF_00439};
CC Peripheral membrane protein {ECO:0000256|HAMAP-Rule:MF_00439}.
CC -!- SIMILARITY: Belongs to the Ycf3 family. {ECO:0000256|HAMAP-
CC Rule:MF_00439}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KC012944; AFZ64265.1; -; Genomic_DNA.
DR EMBL; KC598084; AGI98688.1; -; Genomic_DNA.
DR EMBL; KJ410682; AHX25084.1; -; Genomic_DNA.
DR RefSeq; YP_007317077.1; NC_020014.1.
DR AlphaFoldDB; K9ZWE2; -.
DR EnsemblProtists; AFZ64265; AFZ64265; Naga_1Chloroplast54.
DR GeneID; 14411644; -.
DR OrthoDB; 133at2759; -.
DR Proteomes; UP000019335; Chloroplast.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-UniRule.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR HAMAP; MF_00439; Ycf3; 1.
DR InterPro; IPR022818; PSI_Ycf3_assembly.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR44858; TETRATRICOPEPTIDE REPEAT PROTEIN 6; 1.
DR PANTHER; PTHR44858:SF1; UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED; 1.
DR Pfam; PF00515; TPR_1; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 2.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000313|EMBL:AFZ64265.1};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_00439};
KW Photosynthesis {ECO:0000256|ARBA:ARBA00022531, ECO:0000256|HAMAP-
KW Rule:MF_00439}; Plastid {ECO:0000313|EMBL:AFZ64265.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000019335};
KW Repeat {ECO:0000256|HAMAP-Rule:MF_00439};
KW Thylakoid {ECO:0000256|HAMAP-Rule:MF_00439};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|HAMAP-
KW Rule:MF_00439}.
FT REPEAT 33..66
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 33..66
FT /note="TPR 1"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00439"
FT REPEAT 70..103
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 70..103
FT /note="TPR 2"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00439"
FT REPEAT 118..151
FT /note="TPR 3"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00439"
SQ SEQUENCE 167 AA; 19405 MW; 01A9880C7CD4F52F CRC64;
MNQQNDNFLD KTFTIMADIV IKVLPASQQE KEAFTYYKEG LVAQSSGQYA QALESYYEAL
QLEEDPIDRS YILYNIALIY SNNGEYSIAL QYYHQSLELN PKLSQTYNNI AVIYHYQGVK
SSEKRQSEIA KKLFNKAADY WKEAIRLAPN NYIEAENWLI TTGRELN
//
